Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre7g01045 | ATGGAAGAAGTTCAAGAGTCTCAACCTCAATCAACACTAGATAAAGAAAATGCAGATGAAGTGGTTGATGAAAGTTCTGAACATGGTAAAGGGGAAACACCAGAAGAATTATTGAGTAGTCCTCCAAAAGTTGATTCTGAAGTTGAAGTTCTTCATGAGAAGGTTACTAAACAAATAATTAAGGAAGGTCATGGTCAAAAACCTTCCAAGTATTCAACATGTTTCTTCCATTACAGGGCGTGGTCTGAGAACACGGAGCACAAATTTGAAGATACATGGCAGGAACAACGGCCAACGGAGATAATAATTGGAAAAGAGAAGAAAGAAATGACTGGTTTGGGCATTGGGGTGGCAAGCATGAAAGCTGGAGAGCGAGCATTGCTGCGTGTGAGCTGGGAATTAGGATATGGAAAGGAAGGAAGCTTTTCTTTTCCTAATGTTCCACCCATGGCAGATTTAGTTTATGAAGTTGAGCTCATTGGTTTTGATGAAACAAAAGATGGAAAAGCTCGTAGTGATATGACAGTGGAGGAGCGGATTGGTGCAGCGGATCGAAGAAAGATGGACGGAAATGTTCTGTTTCAGGAAAATAAACTAGAGGAGGCCATGCAACAGTATGAAATGGCCATAGCTTATATGGGAGATGACTTCATGTTCCAGTTATTTGGGAAGTATAGGGATATGGCATTGGCTGTAAAGAATCCGTGCCATCTTAACACGGCAGCCTGTCTGATAAAGCTGAACCGATACGAAGAAGCTATAGGACAATGCAGCATTGTATTGAGTGAGGATGAGAACAATTTGAAGGCTTTATTTAGGAGAGGTAAGGCTAGAGCAGCACTTGGGCAGACAGATGCTGCCAGGGAAGATTTTCTAAAAGCGCGTAAACATGCCCCTGAAGATAAAGCAATTGCAAGAGAATTGAAATTACTTGCTGAACATGACAAAGCTATTTATCAAAAGCAGAAAGAGATCTATAAAGGAATATTTGGACCAAGGCCTCAACCAGTACCTAAGAAAAGGAATTGGGTTTTACTTATTTGGCAGTGGTTGGTTTCAGTGTTTTATAGCTTTATCACACTCTTCAACCGCGAAAAGAACAAATCTGACTAA | 1113 | 0.4079 | MEEVQESQPQSTLDKENADEVVDESSEHGKGETPEELLSSPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFFHYRAWSENTEHKFEDTWQEQRPTEIIIGKEKKEMTGLGIGVASMKAGERALLRVSWELGYGKEGSFSFPNVPPMADLVYEVELIGFDETKDGKARSDMTVEERIGAADRRKMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLIKLNRYEEAIGQCSIVLSEDENNLKALFRRGKARAALGQTDAAREDFLKARKHAPEDKAIARELKLLAEHDKAIYQKQKEIYKGIFGPRPQPVPKKRNWVLLIWQWLVSVFYSFITLFNREKNKSD | 370 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre7g01045 | 370 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Trre7g01045 | 370 | ProSiteProfiles | TPR repeat profile. | 268 | 301 | IPR019734 | GO:0005515 | |
Trre7g01045 | 370 | MobiDBLite | consensus disorder prediction | 16 | 34 | - | - | |
Trre7g01045 | 370 | Gene3D | - | 39 | 164 | IPR046357 | GO:0003755 | |
Trre7g01045 | 370 | SMART | tpr_5 | 183 | 216 | IPR019734 | GO:0005515 | |
Trre7g01045 | 370 | SMART | tpr_5 | 268 | 301 | IPR019734 | GO:0005515 | |
Trre7g01045 | 370 | SMART | tpr_5 | 234 | 267 | IPR019734 | GO:0005515 | |
Trre7g01045 | 370 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 71 | 163 | IPR001179 | GO:0003755 | |
Trre7g01045 | 370 | FunFam | Peptidylprolyl isomerase | 168 | 296 | - | - | |
Trre7g01045 | 370 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Trre7g01045 | 370 | PANTHER | ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED | 98 | 339 | IPR039663 | - | |
Trre7g01045 | 370 | SUPERFAMILY | TPR-like | 175 | 327 | IPR011990 | GO:0005515 | |
Trre7g01045 | 370 | SUPERFAMILY | FKBP-like | 42 | 162 | - | - | |
Trre7g01045 | 370 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 67 | 160 | IPR001179 | GO:0003755 | |
Trre7g01045 | 370 | Gene3D | Tetratricopeptide repeat domain | 165 | 296 | IPR011990 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre7g01045 | Trre-Chr7 | 6970842 | 6973575 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre7g01045 | 48 | 336 | Calmodulin-binding Proteins | AT5G48570 | 33.108 | 2.32e-31 | 123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre7g01045 | - | - | gmx:100790587 | 652.899 |