Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01042 ATGGTGATTGCATGCAATGGTGTACATTTTCTACTAAAGCCTTATCAACAACCCCGCATTACTTCCGACATAATTGTTGGACTAGTTGTGGGAAATGCGCCATTTTTACGCCATCTATATCGACAATTCAACCATACATTTGGATTTATCATTGATTTTGGCATGATGTGTTACATGTTTGCTTTGGGTGTAGAAATGGATCCTTATGTACTCTTCAAAAGACCAAGTAGAGATGTTCAAGTTGCATATGCAGGAATAATCATAACATTTATCCTAGCATTAGCCATAACACCTCTTCTCCATTACTTCACAGGCATAGAGCATATACTAGAATTCACTCTCGCCCTCTCGATTCTTCTCTCAAGTACGGCATCGCCTGTCCTAACCCGTCTCATAACAAGTCTCAACATAGGAAAGTCGGATATTGGGAAACTTGTCATAGCAGCAGGGATGTATTCGGATTTTCTAAGCTCTTTGCTTCTTTCAGTCGGCTACATTTCAATGCCGTTGGACACATTTTGCCACAATGTCGAAAAAAAAGGACGTCTTAAAAGGGCTATTGTAATGAATAGCGCTGTTCTTGGCCAAGCATTGTTCACGGCATTGGTCTCGCCGATTTTCATGAGATGGGTTAACAATGAAAATCCAGAAGGGAAACCTATGAAAGGCTCACATTTAGTACTATCAATAGCATTCATGGTTATGAGTTGTGCTTCATCAATACTATATAACTATAGTCCAATTCTAAGTGCATTTATAACAGGAATTTGTTTTCCTAGGGAAGGAAGAGTTTCAAAATGGGTTATTAGCAAAATCAATTACTTGTTAACAACTATATTTTTTCCAATATTTTTCTTGTGGATGGGTTATGCAGCTGATTTTAGGCAGTTTGAGCCTCAACAATTAGGAACATGGGGAAGATTATTTATACCTGTCTTAATTGTAATGGGAGGTAAAGTTGTTGGAACAGTTGTTTGTGGTGCAATTCTTGGATTTCATTGGCCTGAATCAGTTGCTATTGGATTGCTACTTGCTACCAAGGGACATTTTCATATCTACATGGCTATCAAAGTGATGGGTTGTGGCTCCAATACTTCGGCCGGCATTGCATTGATAATTGCAATATTTTTTACAGTGGTGCATGCCCCATCCGTCGTAGCACATATCATCAAACGAGCCAAGAGAAAAGTACCTACTCATCGCATGTCCCTCCAATTGCTTGATCCATCAAGTGAGCTAAGAATTCTGCTATGCCTTCATGGACCTGACAACATTTCAGCATCCATCAACTTCATGGAGATCTCAAGAGGAAAATCAGATCCCGGCATTCTTGTTTACGTCACGGAAATGATTGAACTAACCAATCAAATAGCAGTGACAGTAGAAAGAGGTGAAGGAATAGAAACAACAAATGTAAAAGACAAGGATGTCATGGAGATGAGAGACACAATAACTAGCTCATTTCAAGCTTATATAGACGATGATGGTGATGGTGTTACACTCAAAAGAACAATGGCGGTGTCGACAATTAATAACATGGCCCAGGACATTTGCACTTTGGCAGAGGATTTGATGATTGCTCTTATCATTCTACCATTCCATAGGAAGCAATGTGTGGATGGAAAATTGGATGGTGGCAATCAAGGATTCAGATATGTAAACAGAAAGTTATTGAAGAGTGCTCCTTGTTCCGTGGGGATTCTAGTGAACAGAGGCTTAGGGTCCATTGAAAAGATATCAAAGACTCATGTATCAATCAATGTTGCAACACTGTTCATTGGTGGAAAAGATGATAGAGAAGCACTTGCCTACGCCGGTCGCGTAGCAGGGCATCCAGGAGTGAAACTCACAGTTATAAGATTCCTAGTAGATACTAGTGTTGAATCTTCAAGAATTGCGGCATATAGGGTAAGCCTACCAGATAAAGGCGAAGAGATGGGGCTAGACGATGAATGTTTTGCACATTTCTATGATAAACATATTTCTGGAGGTCGAATTGCATATATGGAGAAGCATCTTGCTAATGCAGCCGAGACTTTCTCTACACTCAGATCATTTGAAGGACAGTACTCACTGGTCATTGTAGGAAAGGAAGGTGGACTGAACTCGATATTGACGAAGGGAATGAATGATTGGCAACAGTGTCCGGAACTTGGACCGATAGGGGATGTTCTTTCAGGACCAGACTTCTCAAAAACAGTGTCGGTGTTAGTAATCCAACAACACAAACATAAAGGAGAAATAGATGGGCTTGATGAAGAATTCAATATCATGTAG 2277 0.401 MVIACNGVHFLLKPYQQPRITSDIIVGLVVGNAPFLRHLYRQFNHTFGFIIDFGMMCYMFALGVEMDPYVLFKRPSRDVQVAYAGIIITFILALAITPLLHYFTGIEHILEFTLALSILLSSTASPVLTRLITSLNIGKSDIGKLVIAAGMYSDFLSSLLLSVGYISMPLDTFCHNVEKKGRLKRAIVMNSAVLGQALFTALVSPIFMRWVNNENPEGKPMKGSHLVLSIAFMVMSCASSILYNYSPILSAFITGICFPREGRVSKWVISKINYLLTTIFFPIFFLWMGYAADFRQFEPQQLGTWGRLFIPVLIVMGGKVVGTVVCGAILGFHWPESVAIGLLLATKGHFHIYMAIKVMGCGSNTSAGIALIIAIFFTVVHAPSVVAHIIKRAKRKVPTHRMSLQLLDPSSELRILLCLHGPDNISASINFMEISRGKSDPGILVYVTEMIELTNQIAVTVERGEGIETTNVKDKDVMEMRDTITSSFQAYIDDDGDGVTLKRTMAVSTINNMAQDICTLAEDLMIALIILPFHRKQCVDGKLDGGNQGFRYVNRKLLKSAPCSVGILVNRGLGSIEKISKTHVSINVATLFIGGKDDREALAYAGRVAGHPGVKLTVIRFLVDTSVESSRIAAYRVSLPDKGEEMGLDDECFAHFYDKHISGGRIAYMEKHLANAAETFSTLRSFEGQYSLVIVGKEGGLNSILTKGMNDWQQCPELGPIGDVLSGPDFSKTVSVLVIQQHKHKGEIDGLDEEFNIM 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01042 758 Gene3D - 1 399 IPR038770 -
Trre7g01042 758 FunFam Cation/H(+) antiporter 28 1 399 - -
Trre7g01042 758 PANTHER CATION/H + ANTIPORTER 5 744 - -
Trre7g01042 758 Pfam Sodium/hydrogen exchanger family 11 390 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01042 Trre-Chr7 6947903 6951426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01042 8 758 Antiporter Super Family AT3G52080 50.000 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01042 K26731 - gmx:100815945 1126.31