Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01041 ATGGCAATAGCATTAACACAATGCTCAGAAAAGCTAGGATACCTCATATTTCTATTAGGCAAAAACTTCGTCATGTTTATGGCGATGGTGATTGCATGCAATGGTGTACATTTTCTACTAAAGCCTTATCAACAACCCCGCATTACTTCCGACATAATTGTTGGACTAGTTGTGGGAAATGCGCCATTTTTACGCCATCTATATCGACAATTCAACCATACATTTGGATTTATCATTGATTTTGGCATGATGTGTTACATGTTTGCTTTGGGTGTAGAAATGGATCCTTATGTACTCTTCAAAAGACCAAGTAGAGATGTTCAAGTTGCATATGCAGGAATAATCATAACATTTATCCTAGCATTAGCCATAACACCTCTTCTCCATTACTTCACAGGCATAGAGCATATACTAGAATTCACTCTCGCCCTCTCGATTCTTCTCTCAAGTACGGCATCGCCTGTCCTAACCCGTCTCATAACAAGTCTCAACATAGGAAAGTCGGATATTGGGAAACTTGTCATAGCAGCAGGGATGTATTCGGATTTTCTAAGCTCTTTGCTTCTTTCAGTCGGCTACATTTCAATGCCGTTGGACACATTTTGCCACAATGTCGAAAAAAAAGGACGTCTTAAAAGGGCTATTGTAATGAATAGCGCTGTTCTTGGCCAAGCATTGTTCACGGCATTGGTCTCGCCGATTTTCATGAGATGGGTTAACAATGAAAATCCAGAAGGGAAACCTATGAAAGGCTCACATTTAGTACTATCAATAGCATTCATGGTTATGAGTTGTGCTTCATCAATACTATATAACTATAGTCCAATTCTAAGTGCATTTATAACAGGAATTTGTTTTCCTAGGGAAGGAAGAGTTTCAAAATGGGTTATTAGCAAAATCAATTACTTGTTAACAACTATATTTTTTCCAATATTTTTCTTGTGGATGGGTTATGCAGCTGATTTTAGGCAGTTTGAGCCTCAACAATTAGGAACATGGGGAAGATTATTTATACCTGTCTTAATTGTAATGGGAGGTAAAGTTGTTGGAACAGTTGTTTGTGGTGCAATTCTTGGATTTCATTGGCCTGAATCAGTTGCTATTGGATTGCTACTTGCTACCAAGGGACATTTTCATATCTACATGGCTATCAAAGTGATGGGTTGTGGCTCCAATACTTCGGCCGGCATTGCATTGATAATTGCAATATTTTTTACAGTGGTGCATGCCCCATCCGTCGTAGCACATATCATCAAACGAGCCAAGAGAAAAGTACCTACTCATCGCATGTCCCTCCAATTGCTTGATCCATCAAGTGAGCTAAGAATTCTGCTATGCCTTCATGGACCTGACAACATTTCAGCATCCATCAACTTCATGGAGATCTCAAGAGGAAAATCAGATCCCGGCATTCTTGTTTACGTCACGGAAATGATTGAACTAACCAATCAAATAGCAGTGACAGTAGAAAGAGGTGAAGGAATAGAAACAACAAATGTAAAAGACAAGGATGTCATGGAGATGAGAGACACAATAACTAGCTCATTTCAAGCTTATATAGACGATGATGGTGATGGTGTTACACTCAAAAGAACAATGGCGGTGTCGACAATTAATAACATGGCCCAGGACATTTGCACTTTGGCAGAGGATTTGATGATTGCTCTTATCATTCTACCATTCCATAGGAAGCAATGTGTGGATGGAAAATTGGATGGTGGCAATCAAGGATTCAGATATGTAAACAGAAAGTTATTGAAGAGTGCTCCTTGTTCCGTGGGGATTCTAGTGAACAGAGGCTTAGGGTCCATTGAAAAGATATCAAAGACTCATGTATCAATCAATGTTGCAACACTGTTCATTGGTGGAAAAGATGATAGAGAAGCACTTGCCTACGCCGGTCGCGTAGCAGGGCATCCAGGAGTGAAACTCACAGTTATAAGATTCCTAGTAGATACTAGTGTTGAATCTTCAAGAATTGCGGCATATAGGGTAAGCCTACCAGATAAAGGCGAAGAGATGGGGCTAGACGATGAATGTTTTGCACATTTCTATGATAAACATATTTCTGGAGGTCGAATTGCATATATGGAGAAGCATCTTGCTAATGCAGCCGAGACTTTCTCTACACTCAGATCATTTGAAGGACAGTACTCACTGGTCATTGTAGGAAAGGAAGGTGGACTGAACTCGATATTGACGAAGGGAATGAATGATTGGCAACAGTGTCCGGAACTTGGACCGATAGGGGATGTTCTTTCAGGACCAGACTTCTCAAAAACAGTGTCGGTGTTAGTAATCCAACAACACAAACATAAAGGAGAAATAGATGGGCTTGATGAAGAATTCAATATCATGTAG 2361 0.3998 MAIALTQCSEKLGYLIFLLGKNFVMFMAMVIACNGVHFLLKPYQQPRITSDIIVGLVVGNAPFLRHLYRQFNHTFGFIIDFGMMCYMFALGVEMDPYVLFKRPSRDVQVAYAGIIITFILALAITPLLHYFTGIEHILEFTLALSILLSSTASPVLTRLITSLNIGKSDIGKLVIAAGMYSDFLSSLLLSVGYISMPLDTFCHNVEKKGRLKRAIVMNSAVLGQALFTALVSPIFMRWVNNENPEGKPMKGSHLVLSIAFMVMSCASSILYNYSPILSAFITGICFPREGRVSKWVISKINYLLTTIFFPIFFLWMGYAADFRQFEPQQLGTWGRLFIPVLIVMGGKVVGTVVCGAILGFHWPESVAIGLLLATKGHFHIYMAIKVMGCGSNTSAGIALIIAIFFTVVHAPSVVAHIIKRAKRKVPTHRMSLQLLDPSSELRILLCLHGPDNISASINFMEISRGKSDPGILVYVTEMIELTNQIAVTVERGEGIETTNVKDKDVMEMRDTITSSFQAYIDDDGDGVTLKRTMAVSTINNMAQDICTLAEDLMIALIILPFHRKQCVDGKLDGGNQGFRYVNRKLLKSAPCSVGILVNRGLGSIEKISKTHVSINVATLFIGGKDDREALAYAGRVAGHPGVKLTVIRFLVDTSVESSRIAAYRVSLPDKGEEMGLDDECFAHFYDKHISGGRIAYMEKHLANAAETFSTLRSFEGQYSLVIVGKEGGLNSILTKGMNDWQQCPELGPIGDVLSGPDFSKTVSVLVIQQHKHKGEIDGLDEEFNIM 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01041 786 Gene3D - 21 427 IPR038770 -
Trre7g01041 786 FunFam Cation/H(+) antiporter 28 20 427 - -
Trre7g01041 786 PANTHER CATION/H + ANTIPORTER 27 772 - -
Trre7g01041 786 Pfam Sodium/hydrogen exchanger family 29 418 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01041 Trre-Chr7 6947903 6951510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01041 24 786 Antiporter Super Family AT3G52080 49.486 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01041 K26731 - gmx:100815945 1172.15