Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01040 ATGGCAATAGCATTAACACAATGCTCAGAAAAGCTAGGATACCTCATATTTCTATTAGGCAAAAACTTCGTCATGTTTATGGCGATGGTGATTGCATGCAATGGTGTACATTTTCTACTAAAGCCTTATCAACAACCCCGCATTACTTCCGACATAATTGTTGGACTAGTTGTGGGAAATGCGCCATTTTTACGCCATCTATATCGACAATTCAACCATACATTTGGATTTATCATTGATTTTGGCATGATGTGTTACATGTTTGCTTTGGGTGTAGAAATGGATCCTTATGTACTCTTCAAAAGACCAAGTAGAGATGTTCAAGTTGCATATGCAGGAATAATCATAACATTTATCCTAGCATTAGCCATAACACCTCTTCTCCATTACTTCACAGGCATAGAGCATATACTAGAATTCACTCTCGCCCTCTCGATTCTTCTCTCAAGTACGGCATCGCCTGTCCTAACCCGTCTCATAACAAGTCTCAACATAGGAAAGTCGGATATTGGGAAACTTGTCATAGCAGCAGGGATGTATTCGGATTTTCTAAGCTCTTTGCTTCTTTCAGTCGGCTACATTTCAATGCCGTTGGACACATTTTGCCACAATGTCGAAAAAAAAGGACGTCTTAAAAGGGCTATTGTAATGAATAGCGCTGTTCTTGGCCAAGCATTGTTCACGGCATTGGTCTCGCCGATTTTCATGAGATGGGTTAACAATGAAAATCCAGAAGGGAAACCTATGAAAGGCTCACATTTAGTACTATCAATAGCATTCATGGTTATGAGTTGTGCTTCATCAATACTATATAACTATAGTCCAATTCTAAGTGCATTTATAACAGGAATTTGTTTTCCTAGGGAAGGAAGAGTTTCAAAATGGGTTATTAGCAAAATCAATTACTTGTTAACAACTATATTTTTTCCAATATTTTTCTTGTGGATGGGTTATGCAGCTGATTTTAGGCAGTTTGAGCCTCAACAATTAGGAACATGGGGAAGATTATTTATACCTGTCTTAATTGTAATGGGAGGTAAAGTTGTTGGAACAGTTGTTTGTGGTGCAATTCTTGGATTTCATTGGCCTGAATCAGTTGCTATTGGATTGCTACTTGCTACCAAGGGACATTTTCATATCTACATGGCTATCAAAATGGGTTGTGGCTCCAATACTTCGGCCGGCATTGCATTGATAATTGCAATATTTTTTACAGTGGTGCATGCCCCATCCGTCGTAGCACATATCATCAAACGAGCCAAGAGAAAAGTACCTACTCATCGCATGTCCCTCCAATTGCTTGATCCATCAAGTGAGCTAAGAATTCTGCTATGCCTTCATGGACCTGACAACATTTCAGCATCCATCAACTTCATGGAGATCTCAAGAGGAAAATCAGATCCCGGCATTCTTGTTTACGTCACGGAAATGATTGAACTAACCAATCAAATAGCAGTGACAGTAGAAAGAGGTGAAGGAATAGAAACAACAAATGTAAAAGACAAGGATGTCATGGAGATGAGAGACACAATAACTAGCTCATTTCAAGCTTATATAGACGATGATGGTGATGGTGTTACACTCAAAAGAACAATGGCGGTGTCGACAATTAATAACATGGCCCAGGACATTTGCACTTTGGCAGAGGATTTGATGATTGCTCTTATCATTCTACCATTCCATAGGAAGCAATGTGTGGATGGAAAATTGGATGGTGGCAATCAAGGATTCAGATATGTAAACAGAAAGTTATTGAAGAGTGCTCCTTGTTCCGTGGGGATTCTAGTGAACAGAGGCTTAGGGTCCATTGAAAAGATATCAAAGACTCATGTATCAATCAATGTTGCAACACTGTTCATTGGTGGAAAAGATGATAGAGAAGCACTTGCCTACGCCGGTCGCGTAGCAGGGCATCCAGGAGTGAAACTCACAGTTATAAGATTCCTAGTAGATACTAGTGTTGAATCTTCAAGAATTGCGGCATATAGGGTAAGCCTACCAGATAAAGGCGAAGAGATGGGGCTAGACGATGAATGTTTTGCACATTTCTATGATAAACATATTTCTGGAGGTCGAATTGCATATATGGAGAAGCATCTTGCTAATGCAGCCGAGACTTTCTCTACACTCAGATCATTTGAAGGACAGTACTCACTGGTCATTGTAGGAAAGGAAGGTGGACTGAACTCGATATTGACGAAGGGAATGAATGATTGGCAACAGTGTCCGGAACTTGGACCGATAGGGGATGTTCTTTCAGGACCAGACTTCTCAAAAACAGTGTCGGTGTTAGTAATCCAACAACACAAACATAAAGGAGAAATAGATGGGCTTGATGAAGAATTCAATATCATGTAG 2358 0.3995 MAIALTQCSEKLGYLIFLLGKNFVMFMAMVIACNGVHFLLKPYQQPRITSDIIVGLVVGNAPFLRHLYRQFNHTFGFIIDFGMMCYMFALGVEMDPYVLFKRPSRDVQVAYAGIIITFILALAITPLLHYFTGIEHILEFTLALSILLSSTASPVLTRLITSLNIGKSDIGKLVIAAGMYSDFLSSLLLSVGYISMPLDTFCHNVEKKGRLKRAIVMNSAVLGQALFTALVSPIFMRWVNNENPEGKPMKGSHLVLSIAFMVMSCASSILYNYSPILSAFITGICFPREGRVSKWVISKINYLLTTIFFPIFFLWMGYAADFRQFEPQQLGTWGRLFIPVLIVMGGKVVGTVVCGAILGFHWPESVAIGLLLATKGHFHIYMAIKMGCGSNTSAGIALIIAIFFTVVHAPSVVAHIIKRAKRKVPTHRMSLQLLDPSSELRILLCLHGPDNISASINFMEISRGKSDPGILVYVTEMIELTNQIAVTVERGEGIETTNVKDKDVMEMRDTITSSFQAYIDDDGDGVTLKRTMAVSTINNMAQDICTLAEDLMIALIILPFHRKQCVDGKLDGGNQGFRYVNRKLLKSAPCSVGILVNRGLGSIEKISKTHVSINVATLFIGGKDDREALAYAGRVAGHPGVKLTVIRFLVDTSVESSRIAAYRVSLPDKGEEMGLDDECFAHFYDKHISGGRIAYMEKHLANAAETFSTLRSFEGQYSLVIVGKEGGLNSILTKGMNDWQQCPELGPIGDVLSGPDFSKTVSVLVIQQHKHKGEIDGLDEEFNIM 785
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01040 785 FunFam Cation/H(+) antiporter 28 20 426 - -
Trre7g01040 785 Pfam Sodium/hydrogen exchanger family 29 416 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre7g01040 785 Gene3D - 21 426 IPR038770 -
Trre7g01040 785 PANTHER CATION/H + ANTIPORTER 27 771 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre7g01040 Trre-Chr7 6947903 6951510 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01040 24 785 Antiporter Super Family AT3G52080 49.551 0.0 780
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01040 K26731 - gmx:100815945 1168.68