Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01013 ATGAAACCTTTTCTTTTCTTTCTCATCACATTCTCCTTCCTTTGTCAAACACAGTTACCACTAGTTTCCTCTGTCACAACAACTCTACCCTTTCAACTCATCACTCTCCTCTCAATAAAATCCTCCATCATTGACCCTCTCAATCATCTCAATGACTGGGAAATTGACCCTTCTAATTCTTCCCCTACTTTCTCAAACTCCAATAACCACCAAGACCCAATTTGGTGTTCTTGGAGAGGCATCACTTGTCACCCAAAAACAACACAAATCACTTCCCTGAACCTCTCTAACCTCAACCTTTCAGGCACAATTTCACCTCAAATCCGCTACCTAACCACCTTAACCCATTTGAACATAAGCGGCAATGACTTCAATGGAACTTTCCAAACAGGAATATTCCAACTCATTGGGCTTAGAACATTAGACATCAGCCATAATTCCTTCAGCTCAATTTTTCCACCTGGAATTTCAAAGCTAAGATTCTTAAGAATCTTCAATGCTTACAACAACAACTTCACAGGTCCTCTTCCTGAAGAACTAATCAAACTTCCATTTCTAGAGCAGCTCAACCTTGGTGGAAGCTACTTCAGTGGGAGAATCCCACCAAGTTATGGCACTTTTAAAAGACTCAAATTCCTACAATTATCTGGTAATGCATTGGAAGGTTCGCTACCTCCTCAATTAGGCCTATTATCAGAGCTACAACACTTGGAAATTGGATACAACACATTTTCTGGGACATTACCAATTGAATTAACATTGTTGTCTAATCTCACTTACTTAGACATCTCAGCAGCTAACATTTCGGGTGAAGTGATTCCTGAACTAGGAAACTTAACTATGCTTGAAACATTGCTTCTTTTCAGGAATCCCTTAAGTGGCAAAATCCCATCAAGCATAGGAAAGTTGAAATCCCTAAAAGCTATTGATTTATCAGAAAATGAACTCACAGGCTCAATTCCACCCGAAATAGCAATGTTGAAGGAACTAGAAGAATTGAGACTCATGTATAACAAGTTGAATGGTGAAATTCCACAAGGAATTGGTGAGCTTCCAAAACTCAACATTTTCTATGTTTTCAACAATTCACTCAGTGGTACACTACCACCAAAACTCGGCTCCAACGGTTTACTCCAACGACTCGATGTTTCCACAAACTCACTTCAAGGTTCAATCCCTGTTAACATTTGTAAAGGAAACAATCTTGTTAGGTTCAATCTTTTCAACAACAAATTCACCAATAATCTTCCATTATCACTCACAAACTGCACCTCACTAGCCAGAGTTCGTATCCAAAACAACAACCTCAATGGGACCATTCCACAAACACTTACCATGCTTCCTAATTTAACCTACCTTGACTTAAGCAACAACAATTTCAACGGTGAAATTCCTCAAGAATTTGGAAACCTTCAATATTTAAACATCTCCGGAAACTCTTTCGAAAGCGAATTACCAAGCAACATTTGGAATTCGAGTAATCTACAGATTTTCTCAGCTTCATTTTCGAAAATCACCGGTCAAATTCCCGATTTTACCGGTTGCAAAACGATTTACACAATCGAATTGCAAGGGAACTTCATCAACGGTAACATTCCTTGGAATATCCGTGATTGCGAAAAACTGATTCTGTTAAATCTAAGTAGAAACAATCTCACCGGAATCATACCTTGGGAAATTTCAATTCTACCTTCAATCACCGACGTTGATCTCTCACAAAACTCACTCACCGGAATCATCCCTTCAAGCTTCAACAACTGTTCAACTCTCACGAATTTCAATGTCAGTTTCAATTCCTTAACCGGTCCAATTCCTTCCTCCGGCGTCTTCGAGAGCCTTCATCCATCTTCCTACTCCGGCAACCAAAACCTCTGCGGTCATCTTTTGGCCAAACCCTGCACCGCCGCCGCCGGAGAAAACGAACTCGAAGCTCACCGTCAACAGCCAAAGAAAACCGCCGGCGCAATCGTATGGATAATCGCGGCGGCGTTCGGAATCGGTCTCTTCGTTCTCGTCGCCGGTACACGTTGCTTTCATGCAAACTATAACCGTCGATTTAACGGTAACGAAACTAACGGTGAAATCGGACCGTGGAAGTTAACGGCGTTTCAACGGTTAAACTTCACGGCGGATGATGTTCTCGAGTGTGTGTCAAGGTCGGATAAGATATTAGGAATGGGGTCCGCTGGAACAGTTTATAAAGCAGAAATGCCAGGTGGCGAAATCATAGCCGTTAAAAAGCTCTGGTGTAAACAAAAGGAAAGTAATATAATCCGACGGAGGAGAGGAGTTTTAGCAGAAGTTGATGTATTAGGAAATGTGAGACACAGGAACATAGTGAGATTGTTAGGGTGTTGTAGTAACAGGGAATGTACAATGTTGCTCTATGAGTATATGGTCAATGGTAACCTTGATGATTTGTTGCATGCAAAGAATAAAGGGGGTAATATGGTAATTTGTGATTGGTATACTAGGTATAAGATAGCATTGGGTGTGGCACATGGAATTTGTTATCTACATCATGATTGTGATCCTGTGGTTGTGCATAGAGATCTTAAACCTAGTAATATTTTATTGGACGGTGAGATGGAAGCTAGAGTTGCTGATTTTGGTGTTGCTAAGTTGATTCAAACTGATGAATCTATGTCTGTTATTGCTGGATCTTATGGTTACATTGCTCCAGAATATGCTTATACACTCCAAGTTGATGAAAAGAGTGACATTTACAGCTATGGAGTGGTGTTAATGGAAATTTTAAGTGGAAAACGTTCAGTGGATCAAGAATTTGGTGATGGAAACAGTATTGTGGATTGGGTTAGGTCCAAAATAAAAACCAAAGATGGAATTGAAGATATATTGGACAAGAATGCAGAAGCAGGGTGTAGCAAAGTAAGAGAAGAAATGAAACAAATACTTAGAATTGCATTGCTTTGCACAAGTAGAAATCCAGCTGATAGACCTTCAATGAGAGATGTTGTGTTGATGCTTCAAGAGGCAAAACCTAAGAGAAAATTATTTGATAGTGTTGTTTTAGGTCGATGTGCTAATGACAATGTTGATGTTGGTGATGATGGTGGTGATATTCCATTGGCTCAAAAGCCAATTATCAATTAA 3114 0.3995 MKPFLFFLITFSFLCQTQLPLVSSVTTTLPFQLITLLSIKSSIIDPLNHLNDWEIDPSNSSPTFSNSNNHQDPIWCSWRGITCHPKTTQITSLNLSNLNLSGTISPQIRYLTTLTHLNISGNDFNGTFQTGIFQLIGLRTLDISHNSFSSIFPPGISKLRFLRIFNAYNNNFTGPLPEELIKLPFLEQLNLGGSYFSGRIPPSYGTFKRLKFLQLSGNALEGSLPPQLGLLSELQHLEIGYNTFSGTLPIELTLLSNLTYLDISAANISGEVIPELGNLTMLETLLLFRNPLSGKIPSSIGKLKSLKAIDLSENELTGSIPPEIAMLKELEELRLMYNKLNGEIPQGIGELPKLNIFYVFNNSLSGTLPPKLGSNGLLQRLDVSTNSLQGSIPVNICKGNNLVRFNLFNNKFTNNLPLSLTNCTSLARVRIQNNNLNGTIPQTLTMLPNLTYLDLSNNNFNGEIPQEFGNLQYLNISGNSFESELPSNIWNSSNLQIFSASFSKITGQIPDFTGCKTIYTIELQGNFINGNIPWNIRDCEKLILLNLSRNNLTGIIPWEISILPSITDVDLSQNSLTGIIPSSFNNCSTLTNFNVSFNSLTGPIPSSGVFESLHPSSYSGNQNLCGHLLAKPCTAAAGENELEAHRQQPKKTAGAIVWIIAAAFGIGLFVLVAGTRCFHANYNRRFNGNETNGEIGPWKLTAFQRLNFTADDVLECVSRSDKILGMGSAGTVYKAEMPGGEIIAVKKLWCKQKESNIIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMVNGNLDDLLHAKNKGGNMVICDWYTRYKIALGVAHGICYLHHDCDPVVVHRDLKPSNILLDGEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDQEFGDGNSIVDWVRSKIKTKDGIEDILDKNAEAGCSKVREEMKQILRIALLCTSRNPADRPSMRDVVLMLQEAKPKRKLFDSVVLGRCANDNVDVGDDGGDIPLAQKPIIN 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01013 1037 Pfam Leucine Rich Repeat 138 159 IPR001611 GO:0005515
Trre7g01013 1037 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 253 998 - -
Trre7g01013 1037 SUPERFAMILY Protein kinase-like (PK-like) 721 996 IPR011009 -
Trre7g01013 1037 SUPERFAMILY L domain-like 401 626 - -
Trre7g01013 1037 SUPERFAMILY RNI-like 92 437 - -
Trre7g01013 1037 Pfam Protein kinase domain 721 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01013 1037 SMART LRR_typ_2 563 586 IPR003591 -
Trre7g01013 1037 SMART LRR_typ_2 207 231 IPR003591 -
Trre7g01013 1037 SMART LRR_typ_2 279 303 IPR003591 -
Trre7g01013 1037 SMART LRR_typ_2 327 351 IPR003591 -
Trre7g01013 1037 SMART LRR_typ_2 135 159 IPR003591 -
Trre7g01013 1037 SMART LRR_typ_2 447 470 IPR003591 -
Trre7g01013 1037 Gene3D Phosphorylase Kinase; domain 1 694 798 - -
Trre7g01013 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Trre7g01013 1037 FunFam leucine-rich repeat receptor-like protein kinase TDR 799 1008 - -
Trre7g01013 1037 ProSiteProfiles Protein kinase domain profile. 718 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01013 1037 SMART serkin_6 718 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g01013 1037 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 225 320 - -
Trre7g01013 1037 Pfam Leucine rich repeat 425 480 IPR001611 GO:0005515
Trre7g01013 1037 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 129 224 - -
Trre7g01013 1037 Gene3D Transferase(Phosphotransferase) domain 1 799 1011 - -
Trre7g01013 1037 Pfam Leucine rich repeat N-terminal domain 33 83 IPR013210 -
Trre7g01013 1037 FunFam Leucine-rich repeat receptor-like protein kinase TDR 328 635 - -
Trre7g01013 1037 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 687 798 - -
Trre7g01013 1037 Gene3D Ribonuclease Inhibitor 349 641 IPR032675 -
Trre7g01013 1037 Gene3D Ribonuclease Inhibitor 104 348 IPR032675 -
Trre7g01013 1037 Gene3D Ribonuclease Inhibitor 32 103 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01013 Trre-Chr7 6711379 6715843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01013 3 1004 Receptor kinase-like Gene Family AT1G08590 42.233 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre7g01013 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01013 - - gmx:100813189 1590.47