Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00997 ATGGACATGAATTCAAATAATACTCCCGTTCTCACGGATACCGCTCCAATAACAAACTCAAGACTGCATGTGCATTCCAATTTGTTGCCTTATTCTCATACCGGTGCAACCTTTCCTCACGGTATGCTATTGAATATCCCAAGGAAGAAGACGGGAATTCTTGAAGATGTGTTTTCTTGTGGTTGGTTGGATGCCATGAAATCATCTTCACCTCCACCGAAGAATAAAACAAAGGATGTTAATCACGGCTTTGCATCCTCGGAAGCCGATCTTTATTTCAACTGGCTGCTAAAGTATCCATCAGCACTTACATCTTTTGATCAAATTACGAACTACGCAAAAGGCAAAAGAATTGCGCTGTTTTTGGACTATGATGGAACTCTTTCACCAATTGTGGATAATCCTGACTGTGCTTTCATGTCGGATAATATGCGAGCTGCTGTTAAAAAAGTGGCAGAGTATTTTCCAACAGCGATAATTAGCGGAAGAAGCCGCGACAAGGTACATCAATTTGTAGGACTTACCGAACTCTATTATGCTGGTAGCCATGGAATGGACATCATTGGTCCTGTTAGACAATCTCTTTCTGTATCACATAACCACCCTAACTGCATCATTAAGTCTACTGACAAGCAGGGAAAGAAGGTGAATTTATTCCAACCTGCTGCTGAATTCCTGCCAATGATTAATGAGGTGCTTAAGTCTCTTATTGAGTGTACAAAAGACATCAAAGGATCAAAAGTTGAGAACAATAAATTTTGTGTATCTGTACATTACCGCAATGTAGACGAGAAGAGTTGGAGTTTGGTGGCGCAACGAGTTAATGATGTTCTTAAGGGCTTTCCACGTTTGCGTTTAACTCATGGTCGCAAGGTTTTAGAGGTTCGACCTGTGATTAACTGGGATAAGGGAAAAGCCGTCACGTTTTTACTCGAGTCACTTGGACTTAACAATTGTGACGATGTGCTTCCTATATATATTGGTGATGATCGGACAGATGAAGATGCCTTTAAGGTTTTGAGAGAGGGAAATAAAGGTTATGGAATTTTAGTGTCTTCAGCACCAAAAGAAAGTAATGCAAGTTACTCTCTTCGTGATCCGTCGGAGGTCATGGAATTTCTCAAGTCACTTGTGTTATGGAAGCAAAACCCCTTTAAAAGCCATATATAG 1170 0.406 MDMNSNNTPVLTDTAPITNSRLHVHSNLLPYSHTGATFPHGMLLNIPRKKTGILEDVFSCGWLDAMKSSSPPPKNKTKDVNHGFASSEADLYFNWLLKYPSALTSFDQITNYAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKKVAEYFPTAIISGRSRDKVHQFVGLTELYYAGSHGMDIIGPVRQSLSVSHNHPNCIIKSTDKQGKKVNLFQPAAEFLPMINEVLKSLIECTKDIKGSKVENNKFCVSVHYRNVDEKSWSLVAQRVNDVLKGFPRLRLTHGRKVLEVRPVINWDKGKAVTFLLESLGLNNCDDVLPIYIGDDRTDEDAFKVLREGNKGYGILVSSAPKESNASYSLRDPSEVMEFLKSLVLWKQNPFKSHI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00997 389 CDD HAD_TPP 119 372 - -
Trre7g00997 389 Gene3D - 118 208 IPR023214 -
Trre7g00997 389 Gene3D - 222 388 IPR023214 -
Trre7g00997 389 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 383 IPR044651 GO:0004805|GO:0005992
Trre7g00997 389 FunFam Trehalose 6-phosphate phosphatase 222 298 - -
Trre7g00997 389 NCBIfam HAD-IIB family hydrolase 120 341 IPR006379 -
Trre7g00997 389 Pfam Trehalose-phosphatase 121 368 IPR003337 GO:0003824|GO:0005992
Trre7g00997 389 FunFam Trehalose 6-phosphate phosphatase 228 387 - -
Trre7g00997 389 SUPERFAMILY HAD-like 119 381 IPR036412 -
Trre7g00997 389 NCBIfam trehalose-phosphatase 115 378 IPR003337 GO:0003824|GO:0005992
Trre7g00997 389 FunFam Trehalose 6-phosphate phosphatase 118 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00997 Trre-Chr7 6609303 6611988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00997 112 377 Trehalose Biosynthesis Gene Families AT1G70290 26.502 8.84e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00997 K01087 - gmx:100819495 668.307