LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre7g00986	ATGGAGGCCTTTTCTTCAAAGATGCTTCTAATAATTTTTGCCTTTAGTTTCATCACACATTCTATCCAAGCAAATGAAGGACCATACAAACAATCCAACACATTATTCATTAGAAATTCTTGTAGTTCAACTACTTATCCAAGACTATGCTACACTTCCCTAGTGAAGCATGCCGATTTGATTCAAACAAATAAGGTGCTTTTAACGGGCACGGCCTTGAACGTGACTCTTGCATCGGCAAAATCAACCTTGGCTATGATGTCCACTCTCGCTAAAAGCCAAGGGCTAAAGCCAAGTGAGGTTGCGGCTATGAAGGATTGTGTTGAAGTGTTAAGTGACTCTGTTGATGAACTCCGAAGGTCTATCGATGAGATGAGTCGTCTTAGTACTTCAAATTTTGAGCTAACAATGAGCGATGTACAAACTTGGGTTAGTGCTGCTTTGACCGATCAAAGTACTTGTACCGACGGATTTCAAGAGGCTAATGCGAACGGAGAAATTAAGACTGTAGTGAGAGGGAGAATTGTTCAAGTAGCTCAATTGACTAGCAATGCTCTGGCTCTGTTAAACAAACTTGCCACTTCACATCCATAA	594	0.4091	MEAFSSKMLLIIFAFSFITHSIQANEGPYKQSNTLFIRNSCSSTTYPRLCYTSLVKHADLIQTNKVLLTGTALNVTLASAKSTLAMMSTLAKSQGLKPSEVAAMKDCVEVLSDSVDELRRSIDEMSRLSTSNFELTMSDVQTWVSAALTDQSTCTDGFQEANANGEIKTVVRGRIVQVAQLTSNALALLNKLATSHP	197

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre7g00986	197	CDD	PMEI-like_3	40	194	-	-
	Trre7g00986	197	FunFam	Pectinesterase inhibitor 3	32	193	-	-
	Trre7g00986	197	PANTHER	PECTINESTERASE INHIBITOR-LIKE	10	188	-	-
	Trre7g00986	197	Gene3D	Invertase/pectin methylesterase inhibitor family protein	33	194	IPR035513	-
	Trre7g00986	197	SMART	PMEI_2	32	188	IPR006501	GO:0004857
	Trre7g00986	197	Coils	Coil	108	128	-	-
	Trre7g00986	197	Pfam	Plant invertase/pectin methylesterase inhibitor	36	188	IPR006501	GO:0004857
	Trre7g00986	197	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	36	192	IPR035513	-
	Trre7g00986	197	NCBIfam	pectinesterase inhibitor domain	8	192	IPR006501	GO:0004857

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre7g00986	Trre-Chr7	6535236	6535829	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre7g00986	37	192	Carbohydrate Esterase	AT3G14310	30.818	5.97e-22	90.9

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre7g00986	-		-	psat:127105069	297.745

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