Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00986 ATGGAGGCCTTTTCTTCAAAGATGCTTCTAATAATTTTTGCCTTTAGTTTCATCACACATTCTATCCAAGCAAATGAAGGACCATACAAACAATCCAACACATTATTCATTAGAAATTCTTGTAGTTCAACTACTTATCCAAGACTATGCTACACTTCCCTAGTGAAGCATGCCGATTTGATTCAAACAAATAAGGTGCTTTTAACGGGCACGGCCTTGAACGTGACTCTTGCATCGGCAAAATCAACCTTGGCTATGATGTCCACTCTCGCTAAAAGCCAAGGGCTAAAGCCAAGTGAGGTTGCGGCTATGAAGGATTGTGTTGAAGTGTTAAGTGACTCTGTTGATGAACTCCGAAGGTCTATCGATGAGATGAGTCGTCTTAGTACTTCAAATTTTGAGCTAACAATGAGCGATGTACAAACTTGGGTTAGTGCTGCTTTGACCGATCAAAGTACTTGTACCGACGGATTTCAAGAGGCTAATGCGAACGGAGAAATTAAGACTGTAGTGAGAGGGAGAATTGTTCAAGTAGCTCAATTGACTAGCAATGCTCTGGCTCTGTTAAACAAACTTGCCACTTCACATCCATAA 594 0.4091 MEAFSSKMLLIIFAFSFITHSIQANEGPYKQSNTLFIRNSCSSTTYPRLCYTSLVKHADLIQTNKVLLTGTALNVTLASAKSTLAMMSTLAKSQGLKPSEVAAMKDCVEVLSDSVDELRRSIDEMSRLSTSNFELTMSDVQTWVSAALTDQSTCTDGFQEANANGEIKTVVRGRIVQVAQLTSNALALLNKLATSHP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00986 197 CDD PMEI-like_3 40 194 - -
Trre7g00986 197 FunFam Pectinesterase inhibitor 3 32 193 - -
Trre7g00986 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 188 - -
Trre7g00986 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 194 IPR035513 -
Trre7g00986 197 SMART PMEI_2 32 188 IPR006501 GO:0004857
Trre7g00986 197 Coils Coil 108 128 - -
Trre7g00986 197 Pfam Plant invertase/pectin methylesterase inhibitor 36 188 IPR006501 GO:0004857
Trre7g00986 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 192 IPR035513 -
Trre7g00986 197 NCBIfam pectinesterase inhibitor domain 8 192 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00986 Trre-Chr7 6535236 6535829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00986 37 192 Carbohydrate Esterase AT3G14310 30.818 5.97e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00986 - - psat:127105069 297.745