Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00985 ATGGAAGCCTTTTCTTCAAAGATTTTTCTAATAGTTTTTGCCTTTAGTTTCATCACATACTCTATCCAAGCAAATGAATCCAACATTTTATTCATTAGAAGTTCTTGTAGTTCAACAACTTATCCAAGATTATGCTACACCTCCCTAGTGAAATATGCCGATTCCATTCAAACAAATCGCTTACGTTTAACAAACACGGCCTTGAATGTGACTCTTGCATCAGCAAAATCAACCTCGGTTTCGATGTCAACTATCGCTAAAAGCCATGGACTTAGTCCAAAAGAAGTTGCGGCTATGAAGGATTGTGTCGAAGTGCTAAGTGAATCCGTCGATGAACTCCGAAGGTCTATCAATGAGATTGGTCATCTTAGTACTTCAAATTTTGAACTAACGATGAGCGATTTACAAACTTGGGTTAGTGCTGCTTTGACGGATGAGAACACTTGTACCGAAGGATTCCAAGAGATTAATGCAACGGGAAATATTAAGACAATTGTGAGAGGGAAAATTGTGCAAGTAGCTCAATTGACTAGCAATGCTTTGGCTTTGATAAATAAACTTGCTACTTCACATCCTTAA 579 0.3782 MEAFSSKIFLIVFAFSFITYSIQANESNILFIRSSCSSTTYPRLCYTSLVKYADSIQTNRLRLTNTALNVTLASAKSTSVSMSTIAKSHGLSPKEVAAMKDCVEVLSESVDELRRSINEIGHLSTSNFELTMSDLQTWVSAALTDENTCTEGFQEINATGNIKTIVRGKIVQVAQLTSNALALINKLATSHP 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00985 192 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 183 - -
Trre7g00985 192 FunFam Pectinesterase inhibitor 3 27 188 - -
Trre7g00985 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 189 IPR035513 -
Trre7g00985 192 Pfam Plant invertase/pectin methylesterase inhibitor 31 183 IPR006501 GO:0004857
Trre7g00985 192 SMART PMEI_2 27 183 IPR006501 GO:0004857
Trre7g00985 192 NCBIfam pectinesterase inhibitor domain 8 187 IPR006501 GO:0004857
Trre7g00985 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 187 IPR035513 -
Trre7g00985 192 CDD PMEI-like_3 34 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00985 Trre-Chr7 6530687 6531265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00985 23 187 Carbohydrate Esterase AT3G14310 32.571 3.38e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00985 - - psat:127105069 291.967