Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00983 ATGGCATTGCAATTGCATACTCTTATTGGACATTGTTCAATGAGTCACCATAATCTCTTCAAAATAATTTTTTACCTTCTATTCATCTCAACTCTTATTCACTCTACAACATCTACATCCAATTGCACCAAAAATTCCACTTCAACAATTTACAAAAAGTTTTTAAAGAGTCAATGTAATTCAACCACATATCCTAATGTTTGCTACAAGTCACTTTCACCATACACATCAAAAATCAAAACAAACCCTTTAACACTCACCAAAATATCTATCTATCTAGCCCTAAAATCAGCAAGAAGTGCATCAATGACATTGAAAAGACTAAGTTCAAAGAAGCTAACACATGCCGAAACATTGGTCATTGCCGATTGTAGCGAAAATGTCGAAGACACGGTGGATTCACTCGAAGAATCGGCCGATGGACTTGTGCATTTGAATGGTACTACAACTAATGATGAAAAGTTTAAATGGGATACTATAAAGACATGGATGAGTGCAGCTATAACTGATGAGGGAACATGTACGGATGAGTTTGATGAAATGGAAGTTAGGTCTTCAATAAAGAAGATGATCACCACAAGTGTTGGTAATCTTCTTTACATGACTAGTAATGCTTTGGCTTTTGTAAACAGGCTTTCCTTCTAG 645 0.355 MALQLHTLIGHCSMSHHNLFKIIFYLLFISTLIHSTTSTSNCTKNSTSTIYKKFLKSQCNSTTYPNVCYKSLSPYTSKIKTNPLTLTKISIYLALKSARSASMTLKRLSSKKLTHAETLVIADCSENVEDTVDSLEESADGLVHLNGTTTNDEKFKWDTIKTWMSAAITDEGTCTDEFDEMEVRSSIKKMITTSVGNLLYMTSNALAFVNRLSF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00983 214 NCBIfam pectinesterase inhibitor domain 24 212 IPR006501 GO:0004857
Trre7g00983 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 25 208 - -
Trre7g00983 214 Pfam Plant invertase/pectin methylesterase inhibitor 54 207 IPR006501 GO:0004857
Trre7g00983 214 CDD PMEI-like_3 59 213 - -
Trre7g00983 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 213 IPR035513 -
Trre7g00983 214 SMART PMEI_2 50 208 IPR006501 GO:0004857
Trre7g00983 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 212 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00983 Trre-Chr7 6517696 6518340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00983 33 213 Carbohydrate Esterase AT1G53830 29.189 4.54e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00983 - - cam:101501841 312.768