Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00958 ATGGCTAAGATTTCTAATCCCTTTCAAATTTTCAACTTCATGACAATTCTATTACTCTCATCATACTATATTTTCCCTCCATGTATGTCTCTAACAATTGAAACAAAAGCACTTCTTGATTTCAAAAACCATTTGAAAGACTCATTGAACACTTTAGCTTCATGGAATGAATCAAACACTCCATGCAACTTTCATGGAATTACATGTGATCCACTATCTTCCAAAGTCATAGAAATCTCATTAGACGATAACTCGCTCTCCGGCGAAATTTTTCCGTCTATCTCAATTCTTAATAGCCTACAAGTTCTTTCATTACCATCCAATTCCATTTCCGGAAAACTTCCGTTAGAAGTAACCAAATTTATAAACCTCAAAGTCTTGAATCTATCGGGAAATGAGCTTGTCGGAGCTATTCCGGATATGTCTGGATTGAGAAACCTTCAAGTTCTTGATCTTTCAGCGAATTATTTTTCCGGTCAAATCCCTAGTTGGATAGGGAATCTCACAAGACTAGTTTCACTTGGTCTCGGTGAAAATCTTTACACTGAGAATGTCATACCAGAGAGTCTCGGAAATTTGAAGAACTTGACGTGGCTTTATCTACGCGGTTCTCATTTGACAGGAGAGATTCCAGAATCAATATACGAAATGGAAGCATTGGAGACTTTAGATATTTCAAGAAACAGGTTATCCGGTAAAATCTCGAGATCGATTTCAAAGCTGAAAAATATTTACAAGATTGAGTTGTTTTCGAACAATTTGGTAGGCGAAATACCAGAAGAACTTGCGAATTTAACGAATTTGCAAGAGATTGATCTTTCTGCAAACAACATGTTTGGTAAATTGCCTAAACAAATTGGTGATATGAAGAATTTAGTTGTTTTTCAACTCTATGATAACAACTTTTCTGGTGAAATTCCTGAAGGATTTGGTGATATGGCAAATCTCAAAGGTTTTTCGGTTTACAGAAACATGTTCAATGGAACTATATCGGAGAATTTCGGCCGATTTTCTCCACTTGAAAGTATTGACATATCAGAGAATCAATTTTCAGGTTTTTTTCCAAAGTTCTTGTGTGAAAAAAGAAAGTTGAAATTTTTGCTTGCATTGCAAAACAATTTCTCTGGAAATTTTTCTGAATCTTATGGTTTGTGCAAATCACTTGAAAGATTAAGGATTAGTAGGAATTTTTTATCTGGAAAAATTCCTAAAGGTGTTTGGTCACTTCCTAATGCAAAAATAATTGATTTAGGTTTTAACAGTTTCAGTGGCGAAGTATCTTCCGATATCGGAAATTCAACGAGCTTAACTGAGATTGTTTTGATGAACAACAAGTTTTCAGGTAAGGTTCCTTCACAATTTAAAAAATTGGTGAATTTGGAGAAACTTTATTTGAGTAACAACAATTTCACTGGTGAAATTCCACATGAAATTGGATTTTTAAAGCAATTATCCACTTTGCATTTGGAAGAAAATTCATTAACTAGTTTGATACCGAACGAACTAGGCCGTTGTTTGAGGCTGGTCGATTTGAATCTTGCTAGTAATAATTTATCAGGAAACATTCCAAATTCGTTTTCACTTATGAGATCATTGAATTCTCTAAATTTGTCAGGAAACAAACTTACAGGTTGGATTCCTGAAAATTTAGAGAAAATGAAACTAAGCTCAGTGGATTTTTCTGATAATTTTCTTTCTGGTGGAATTCCATTTTGGATTTTTATCATTGGTGGAGAAAAGGCTTTTGTTGGAAACAAAGATTTGTGTGTTGAAAAAAATCCGAAAGCTTTGGTGAGTTCTGAGTTGAAGATTTGTGATAAAGGTAATGGTCGTAGAAAAACGATCTTTGCTTATAAATATCTCTTGCTCTTTTTCATTGCTGTTATATTCGGCGCTGTGATTTTGATTGGTAGATGGATTAAGAATCGAAGAGGAAAAAAGGTACAAAATGTTCAAAAGGAAGGACATGAAAAATGGAAACTAGCATCTTTCCACCAAGTGGATATTGATGCTGATGAAATAAGTCATTTGAAAGAAGATAATTTAATCGGCTACGGTGGTACCGGAAAGGTTTATCGAGTCGAATTGAAGAGAAACGGTGCACTGGTGGCCGTGAAGCAACTAGAGAAAGGGAATGATGTGAGGATTTTAGCCGCAGAAATAGAGATTTTAGGGAAAATTAGACATAAAAATATACTTAAACTTTATGCTTGTTTTCTTAAAGGAGAAACGAGTCTTTTAGTTTACGAGTATATGTCAAATGGTAATCTTTTTCAAGCTCTTCACAGAGAGATAAAAGACGAGAATGTCACATTTGATTGGAACCGAAGGTATAAAATTGCGTTGGGAGGGGCAAAAGGGATTTGCTATTTGCACCATGATTGTTCTCCACCTGTTATTCATAGGGATATAAAATCTAGCAATATTTTGCTTGGTGAAGATTATGAAGCAAAAATTGCTGATTTTGGTGTTGCAAGGTTTGCAGAAAAATCTCAGATGGATTCTAGCTCTTTTGCCGGCACACATGGTTATATTGCCCCAGAACTGGCTTATACAACTGAAATAACCGAAAAGTGTGATGTGTACAGCTTCGGAATTGTACTATTAGAGTTAGTATCTGGTCGCGAAGCTGTTGAAGAGGAATACGGTGAAGCAAAAGATATTGTTTATTGGGTTATGACCAATCTTCATGACCGTGAAAGTGTACTCAACATTCTTGACGATAGAGTTGCATCAACACACTGTGTCGATGATATGATAAAAGTGTTGAAGATCGCAATTAAGTGCACTACTAAGCTTCCAACTTTGCGTCCTACAATGCGAGATGTTGTTAAGATGCTTATCGATTCTGAACCTTGCAAGATGAAATCTCATGGATGTGGTCCTGAGAAAGATGCAAGATCATTTGTGTAG 2913 0.3539 MAKISNPFQIFNFMTILLLSSYYIFPPCMSLTIETKALLDFKNHLKDSLNTLASWNESNTPCNFHGITCDPLSSKVIEISLDDNSLSGEIFPSISILNSLQVLSLPSNSISGKLPLEVTKFINLKVLNLSGNELVGAIPDMSGLRNLQVLDLSANYFSGQIPSWIGNLTRLVSLGLGENLYTENVIPESLGNLKNLTWLYLRGSHLTGEIPESIYEMEALETLDISRNRLSGKISRSISKLKNIYKIELFSNNLVGEIPEELANLTNLQEIDLSANNMFGKLPKQIGDMKNLVVFQLYDNNFSGEIPEGFGDMANLKGFSVYRNMFNGTISENFGRFSPLESIDISENQFSGFFPKFLCEKRKLKFLLALQNNFSGNFSESYGLCKSLERLRISRNFLSGKIPKGVWSLPNAKIIDLGFNSFSGEVSSDIGNSTSLTEIVLMNNKFSGKVPSQFKKLVNLEKLYLSNNNFTGEIPHEIGFLKQLSTLHLEENSLTSLIPNELGRCLRLVDLNLASNNLSGNIPNSFSLMRSLNSLNLSGNKLTGWIPENLEKMKLSSVDFSDNFLSGGIPFWIFIIGGEKAFVGNKDLCVEKNPKALVSSELKICDKGNGRRKTIFAYKYLLLFFIAVIFGAVILIGRWIKNRRGKKVQNVQKEGHEKWKLASFHQVDIDADEISHLKEDNLIGYGGTGKVYRVELKRNGALVAVKQLEKGNDVRILAAEIEILGKIRHKNILKLYACFLKGETSLLVYEYMSNGNLFQALHREIKDENVTFDWNRRYKIALGGAKGICYLHHDCSPPVIHRDIKSSNILLGEDYEAKIADFGVARFAEKSQMDSSSFAGTHGYIAPELAYTTEITEKCDVYSFGIVLLELVSGREAVEEEYGEAKDIVYWVMTNLHDRESVLNILDDRVASTHCVDDMIKVLKIAIKCTTKLPTLRPTMRDVVKMLIDSEPCKMKSHGCGPEKDARSFV 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00958 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Trre7g00958 970 SMART LRR_typ_2 144 168 IPR003591 -
Trre7g00958 970 SMART LRR_typ_2 529 553 IPR003591 -
Trre7g00958 970 SMART LRR_typ_2 193 217 IPR003591 -
Trre7g00958 970 SMART LRR_typ_2 457 479 IPR003591 -
Trre7g00958 970 SMART LRR_typ_2 265 289 IPR003591 -
Trre7g00958 970 SMART LRR_typ_2 481 505 IPR003591 -
Trre7g00958 970 FunFam Leucine-rich receptor-like protein kinase family protein 189 284 - -
Trre7g00958 970 Pfam Protein kinase domain 679 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00958 970 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Trre7g00958 970 SUPERFAMILY RNI-like 247 567 - -
Trre7g00958 970 FunFam Probable inactive receptor kinase RLK902 31 188 - -
Trre7g00958 970 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 362 948 - -
Trre7g00958 970 Gene3D Ribonuclease Inhibitor 31 181 IPR032675 -
Trre7g00958 970 Gene3D Transferase(Phosphotransferase) domain 1 752 958 - -
Trre7g00958 970 Gene3D Ribonuclease Inhibitor 316 599 IPR032675 -
Trre7g00958 970 ProSiteProfiles Leucine-rich repeat profile. 123 145 IPR001611 GO:0005515
Trre7g00958 970 Pfam Leucine Rich Repeat 220 241 IPR001611 GO:0005515
Trre7g00958 970 FunFam Receptor-like protein kinase HSL1 291 597 - -
Trre7g00958 970 SUPERFAMILY L domain-like 60 330 - -
Trre7g00958 970 SUPERFAMILY Protein kinase-like (PK-like) 673 947 IPR011009 -
Trre7g00958 970 FunFam Leucine-rich receptor-like protein kinase family protein 667 751 - -
Trre7g00958 970 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 752 963 - -
Trre7g00958 970 ProSiteProfiles Protein kinase domain profile. 677 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00958 970 SMART serkin_6 677 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00958 970 Pfam Leucine rich repeat 435 494 IPR001611 GO:0005515
Trre7g00958 970 Pfam Leucine rich repeat 145 206 IPR001611 GO:0005515
Trre7g00958 970 Gene3D Phosphorylase Kinase; domain 1 647 751 - -
Trre7g00958 970 Gene3D Ribonuclease Inhibitor 182 242 IPR032675 -
Trre7g00958 970 Gene3D Ribonuclease Inhibitor 243 315 IPR032675 -
Trre7g00958 970 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00958 Trre-Chr7 6326865 6329902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00958 23 958 Receptor kinase-like Gene Family AT1G72180 54.162 0.0 993
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre7g00958 Pkinase 8.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00958 - - gmx:100789704 1358.2