Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00910 ATGGCTTTTTGGGGTGTTGAAATCAAACCTGGAAAGCCTTTTACTCACACATACGATGGTTCCAAAGGACGCCTTCACATTTCAATGGCCACTTTGGGACTTGGCACTGCAATCACGAAAAGCACACTGCAATGTAATGTGGGAAACAAAAGCCCTGTTTATCTTTGCTCTCTTTATCCTGGAAAAACTGAGTCGTTGCAATTGAATTTGGAGCTTGAGGAAGATGGCAATGTTATTTTCTCCGTCATTGGCCCTCGGAGTATTCATCTATGCGGTTATTATCTTGCTCGTGGCCGCTATTCCAATACTCTTGATGAATCGGAATCATATGGAGAAGATATAGCTGATACAGAAACAGAGAAATCCGTTCACAGTGATGAAGATGACTACGATGATAGTTTTATTGATGATGACAATGATCCAGCAGTTTTCTCAGCATCTCCTATTTCCAATGAAGAGGATGCATCTTATGATAGCGGACGGAAAAGTGCGAAAGGCAGCCGAAGAAGGCTGAGGAAGAAGTACCAATTGGTAGAGTCGGATGATGATATTGGTCTTGAAGAAAAGAAAATTGTCAATGACAATGTGTTTGTACAATCTCAGGAAACTGATAATGAAGATAGTCTACCAATTTCATCTATTTGCAAGAATAAAGCCTCTGGAAGGATCTTGGATCAGGAAATGGATGATATTGTTGACAAAGAAGCAGTCGATGCTGGCAAAAAAGACAGTGAAGACCCTGAGAATAGTACTATTGAAACAAAATTGAAAACCGACAATGTTGTTGCAGATAATCAGACTCATAGGGAAGCTGAACCCTCAGATCCCTTGGCAGTTCCTTGCACTGTTCCGGATGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGGAAAGGAGAAAGAAACCAAGAGTTCTTGTAATGGTCATTCCACCGAACTAGATAATGCTGCGCAAGATGAGCAAAAAATGAACACGGCCCAGGATCTCTTGGATCAGGAAATGGCTGATAATGTTGACAAAGAAGCAGTTGATGCTGGAAAAAAAGACGGCGAAGACCCTGAGAATAGTACAATTGAAACAATGAAAACTGACAATGTTGTTACAGATATTCAGACTCACAGGGAAGCTGAACCCTCAGATCCCTTGGCAATTCCTTGCACTGTTCCGGATGTTGGGGATGTTAAAAAGTCAAAAAAGAAAAAGAAGGGAAAGGAGAAAGAAACCAAGAGTTCTTCTAATGGTCATTCCATCGAACTAGATAATGCTGCACAAGATGAGCAAAAAATGAACATGGCCCAGGATCTCTTGGATCAGGAAATGGCTGATAATGTTGACAAAGAAGCCGTTTATGCTGGCAATAATGAACAGCACCAGCAGCAAGCTGATGATAAGAAAGCTGAAACCGAGGATAAAATACTTCCTTCTTCACAGGTTGGTCAAGGACAGGATGAAAAACCAAAGAGAAAAAGGAAGGAACGGTCAAAGGAGGAGACAATTTTTACTGCTGATGATGCTTGTATTAACAATGTTGTTAACCTGCCACAGGGAAATGAAGGCAATAATCAGGACATAGTTAATAGGGATGTTAAGATTTCAGACAGTGTTGCACTACCTTCCACTGAAACGGATTCTCCAAAGAAAACAAAGAGGAGAAAAAAAGAACATAAGAACAAATCCTCACTTCCTGAAGGTGGCAATGGAAATGCTGAAGGTATCATTCAAGATGAGGAAGCCAACAAAGAGACAGCAGAGTCCGATAGTCTGATTCATAAACTTTCTGAAACGAAAGAGCAACATCAGAAGCTAACAATTGAAAATGTGGACAATGGGGCTCAAGACAATCCCGATGGAAATCAATCTGAAGATAAGAAGGTTAAGAAAAAGAAGAAAAGTAAAAGTCAGGGCAGTGAAGTTGCAAATTCTGCTTTGCCTGTATCGGTTGAGCCAAGTACCGAGATGATGAAGGAGGATGGAAATAATATGGAGGATACAAAGTCTTCCCAAGTTAGAACATTGTCAAATGGACTTGTTATTCAAGAGCTAGAGACGGGGAAAGAAAATGGGAAAATTGCTGCATTAGGGAAAAAGATCAGCATCAATTACTCTGGCAAGTTGAAGGAAAATGGTGTGGAGGTTGAGTCAAATGCTGGCCAAGCCCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTGAGGGTTTGGATATTGGCCTTGAAGGCATGCGAGTTGGAGAAAAGAGAAGACTTGTAATTCCACCATCAATGACGTCTAAGAAGAATGGTGACAGTGAAAACATACCACCGAATTCATGGTTGATTTATGAATTGGAACTTGTTAAAGTGCATTGA 2352 0.4048 MAFWGVEIKPGKPFTHTYDGSKGRLHISMATLGLGTAITKSTLQCNVGNKSPVYLCSLYPGKTESLQLNLELEEDGNVIFSVIGPRSIHLCGYYLARGRYSNTLDESESYGEDIADTETEKSVHSDEDDYDDSFIDDDNDPAVFSASPISNEEDASYDSGRKSAKGSRRRLRKKYQLVESDDDIGLEEKKIVNDNVFVQSQETDNEDSLPISSICKNKASGRILDQEMDDIVDKEAVDAGKKDSEDPENSTIETKLKTDNVVADNQTHREAEPSDPLAVPCTVPDVGDIKKSKKKKKGKEKETKSSCNGHSTELDNAAQDEQKMNTAQDLLDQEMADNVDKEAVDAGKKDGEDPENSTIETMKTDNVVTDIQTHREAEPSDPLAIPCTVPDVGDVKKSKKKKKGKEKETKSSSNGHSIELDNAAQDEQKMNMAQDLLDQEMADNVDKEAVYAGNNEQHQQQADDKKAETEDKILPSSQVGQGQDEKPKRKRKERSKEETIFTADDACINNVVNLPQGNEGNNQDIVNRDVKISDSVALPSTETDSPKKTKRRKKEHKNKSSLPEGGNGNAEGIIQDEEANKETAESDSLIHKLSETKEQHQKLTIENVDNGAQDNPDGNQSEDKKVKKKKKSKSQGSEVANSALPVSVEPSTEMMKEDGNNMEDTKSSQVRTLSNGLVIQELETGKENGKIAALGKKISINYSGKLKENGVEVESNAGQAPFKFRLGKGEVIEGLDIGLEGMRVGEKRRLVIPPSMTSKKNGDSENIPPNSWLIYELELVKVH 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00910 783 MobiDBLite consensus disorder prediction 114 128 - -
Trre7g00910 783 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 692 780 IPR001179 GO:0003755
Trre7g00910 783 MobiDBLite consensus disorder prediction 109 172 - -
Trre7g00910 783 MobiDBLite consensus disorder prediction 509 543 - -
Trre7g00910 783 MobiDBLite consensus disorder prediction 483 501 - -
Trre7g00910 783 Gene3D Nucleoplasmin core domain 1 98 - -
Trre7g00910 783 Gene3D - 649 783 IPR046357 GO:0003755
Trre7g00910 783 MobiDBLite consensus disorder prediction 237 253 - -
Trre7g00910 783 MobiDBLite consensus disorder prediction 334 359 - -
Trre7g00910 783 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Trre7g00910 783 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 695 783 IPR001179 GO:0003755
Trre7g00910 783 MobiDBLite consensus disorder prediction 575 604 - -
Trre7g00910 783 MobiDBLite consensus disorder prediction 237 670 - -
Trre7g00910 783 SUPERFAMILY FKBP-like 654 782 - -
Trre7g00910 783 MobiDBLite consensus disorder prediction 309 332 - -
Trre7g00910 783 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00910 Trre-Chr7 6046682 6054283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00910 695 780 Calmodulin-binding Proteins AT5G48570 36.782 3.64e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00910 K14826 - jre:109006154 449.129