Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00888 ATGGTTGGTGATATTAGAGATATGGTTAAGATGATTAAAGAAGCTAAATCTAAACCTATGGATCCTTACTCTAATGATATTGCTCCTCGTGTTTTGCCTTTTGTTGTTCATACTATTGCTAAATATGGGAAGAGTTCATTTATGTGGCTTGGTCCAAGACCTAGGATATTCATAATGGATCCAGACAAAATCAAAGAAATGACAAACAAGGTGTATGATTTTCAGAAACCAGATACAAGTCCACTTTTCAAGCTTTTAGCATCCGGTTTTGCAAATTATGATGGAGACAAATGGGCTAAACACAGAAAAATTGTCAGCCCAGCATTCAATGTGGAGAAAATGAAGATGTTGATACCAATATTTTGCAAATCATGTGATGATATGATCAACAAATTGGACAAAGTAGTAACTTCATCCAATGGACCATGTGAGTTAGATATATGGCCTTTCGTCCAAAATGTTTCAAGTGATGTCCTAGCTCGTGCAGGCTTTGGAAGTAGCTTTGAAGAAGGAAAACGAGTTTTTGAACTTCAAAGTGAAATGCTTACACTTACAATTACCCTCTTTAAGTTTGCTTTCATTCCAGGTTACAGGTTCTTGCCAACATATACCAACAGGAGGATGAAAGCAATTGACTTAGAAATAAGAACATCACTAATGAAAATCATAAACAGAAGATTAAAAGCAATGAAAGCAGGGGAACCTGCAAACAATGACTTATTAGGCCTACTTTTGGAATCAAATTATAAAGAATCTGAAAAAGCTAATGGTGGTGGAGGAATGAGTTTAAGGGAAGTAGTTGAAGATGTTAAGCTATTTTATTTGGCAGGACAAGAAGCAAATGCAGAATTGCTTGTCTGGACTTTGTTATTACTTGCTAAGAATCCTGAATGGCAAGCAAAAGCAAGGGAAGAAGCTTTTCAAGTGTTTGGTCATGAAAATCCAGATTATGAAAATATTGGTCAACTTAAAATTGTATCAATGATTCTACAAGAAAGTCTAAGGCTATATCCACCAGGTGTTATGATAGCTAGATTCCTTCGTAAAGACACAAAACTTGGAGACCTAATACTACGTGCAGGAGTAGAACTCATAATACCAATATTAATGATACACCAAGAAAAAGAATTTTGGGGAGATGATTCTGGAGAGTTCAAACCAGAAAGATTCTCTGAAGGAGTTTCAAAGGCAACAAATGGAAAATTTTCTTACTTACCATTTGGAGGGGGTCCTAGACTTTGTATAGGACAAAATTTTGGCTTATTAGAAGCTAAAATTGCTGTATCAATGATCCTTAGAAAATTTTCTTTAGAGTTCTCACCTTCCTATAAGCATGCTCCTTCCTTTATTATTACTCTTCGGCCTGAGCATGGTGCATATCTCATTTTGCATAAACTTTAG 1401 0.3555 MVGDIRDMVKMIKEAKSKPMDPYSNDIAPRVLPFVVHTIAKYGKSSFMWLGPRPRIFIMDPDKIKEMTNKVYDFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKMKMLIPIFCKSCDDMINKLDKVVTSSNGPCELDIWPFVQNVSSDVLARAGFGSSFEEGKRVFELQSEMLTLTITLFKFAFIPGYRFLPTYTNRRMKAIDLEIRTSLMKIINRRLKAMKAGEPANNDLLGLLLESNYKESEKANGGGGMSLREVVEDVKLFYLAGQEANAELLVWTLLLLAKNPEWQAKAREEAFQVFGHENPDYENIGQLKIVSMILQESLRLYPPGVMIARFLRKDTKLGDLILRAGVELIIPILMIHQEKEFWGDDSGEFKPERFSEGVSKATNGKFSYLPFGGGPRLCIGQNFGLLEAKIAVSMILRKFSLEFSPSYKHAPSFIITLRPEHGAYLILHKL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00888 466 PRINTS E-class P450 group I signature 154 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00888 466 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00888 466 PRINTS E-class P450 group I signature 39 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00888 466 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00888 466 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00888 466 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00888 466 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00888 466 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00888 466 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00888 466 Gene3D Cytochrome P450 18 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00888 466 SUPERFAMILY Cytochrome P450 30 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00888 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Trre7g00888 466 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 459 - -
Trre7g00888 466 Pfam Cytochrome P450 39 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00888 Trre-Chr7 5927167 5931128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00888 1 466 Cytochrome P450 AT3G14690 52.146 0.0 540