Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00886 ATGGAAAACTTAGGAACATTATTATCATCACTAAATATGAATCCTAGAAATGCAATTTTCACTATAGTTGCTATGGTTTTGATATGGTGGATATGGAGTGCACTAGATTGGATTTGGTTCACACCAAAAAGAATAGAGAAACGTCTAAAACAACAAGGTCTTAAAGGAAATTCATATAGACTCATGGTTGGTGATATTAGAGATATGGTTAAGATGATTAAAGAAGCTAAATCTAAACCTATGGATCCTTACTCTAATGATATTGCTCCTCGTGTTTTGCCTTTTGTTGTTCATACTATTGCTAAATATGGGAAGAGTTCATTTATGTGGCTTGGTCCAAGACCTAGGATATTTATAATGGATCCAGACAAAATCAAAGAAATGACAAACAAGGTGTATGATTTTCAAAAACCAGATACAAGTCCACTTTTTAAGCTTTTAGCATCAGGCTTTGCAAATTATGATGGAGACAAATGGGCCAAACACAGAAAAATTGTCAGCCCAGCATTCAATGTGGAGAAAATGAAGATGTTGATACCAATATTTTGCAAATCATGTGATGATATGATCAACAAATTGGACAAAGTAGTAACTTCATCCAATGGGCCATGTGAGTTAGATATATGGCCTTTTGTCCAAAATGTTTCAAGTGATGTCCTAGCTCGTGCAGGCTTTGGAAGTAGCTTTGAAGAAGGAAAACGAGTTTTTGAACTTCAAAGAGAAATGCTTACACTTACAATGACCCTCTTTAAATTTGCTTTCATTCCAGGTTACAGGTTCTTGCCAACATATACCAACAGGAGGATGAAAGCAATTGATTTAGAAATAAGAACATCACTAATGAAAATCATAAACAGAAGATTAAAAGCAATCAAAGCAGGGGAACCTACAAACAATGACTTATTAGGCATACTTTTGGAATCAAATTATAAGGAATCTGAAAAAGCTAATGGTGGTGGAGGAATGAGTTTAAGGGAAGTAGTTGAAGAAGTTAAGCTATTTTATTTGGCAGGACAAGAAGCAAATGCTGAATTGCTTGTTTGGACTTTGTTATTACTTGCTAAGAATCCTGAATGGCAAGCAAAAGCAAGGGAAGAAGCTTTTCAAGTGTTTGGTCATGAAAATCCAGATTATGAAAAAATTGGTCAACTTAAAATTGTATCAATGATTCTACAAGAAAGTCTAAGACTATATCCACCGGTTATTATGCTATCTAGATTCCTTCGTAAAGACACAAAACTCGGAGACCTAACCCTACCTGCAGGAGTAGAACTCATAGTTCCTGTATCAATGATGCACCAAGAAAAAGAATTTTGGGGAGATGATTCTGGAGAGTTCAAGCCAGAAAGATTCTCAGAAGGAGTTTCAAAGGCAACAAATGGAAAATTTTCTTACTTACCATTTGGAGGGGGTCCTAGACTTTGTATAGGACAAAATTTTGGCTTATTAGAAGCTAAAATTGCTGTGTCAATGATCCTTAGAGAATTTTCTTTAGAGTTTTCACCTTCCTATAAACATGCTCCTTCCTTTATTATTACTCTTCAGCCTGAACATGGTGCACATCTCATTTTGCATAAACTTTAG 1584 0.3516 MENLGTLLSSLNMNPRNAIFTIVAMVLIWWIWSALDWIWFTPKRIEKRLKQQGLKGNSYRLMVGDIRDMVKMIKEAKSKPMDPYSNDIAPRVLPFVVHTIAKYGKSSFMWLGPRPRIFIMDPDKIKEMTNKVYDFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKMKMLIPIFCKSCDDMINKLDKVVTSSNGPCELDIWPFVQNVSSDVLARAGFGSSFEEGKRVFELQREMLTLTMTLFKFAFIPGYRFLPTYTNRRMKAIDLEIRTSLMKIINRRLKAIKAGEPTNNDLLGILLESNYKESEKANGGGGMSLREVVEEVKLFYLAGQEANAELLVWTLLLLAKNPEWQAKAREEAFQVFGHENPDYEKIGQLKIVSMILQESLRLYPPVIMLSRFLRKDTKLGDLTLPAGVELIVPVSMMHQEKEFWGDDSGEFKPERFSEGVSKATNGKFSYLPFGGGPRLCIGQNFGLLEAKIAVSMILREFSLEFSPSYKHAPSFIITLQPEHGAHLILHKL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00886 527 FunFam Cytochrome P450 734A1 39 527 - -
Trre7g00886 527 CDD CYP72 93 523 - -
Trre7g00886 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Trre7g00886 527 Gene3D Cytochrome P450 37 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00886 527 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00886 527 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00886 527 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00886 527 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00886 527 Pfam Cytochrome P450 100 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00886 527 PANTHER CYTOCHROME P450 FAMILY MEMBER 29 520 - -
Trre7g00886 527 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00886 527 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00886 527 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00886 527 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00886 527 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00886 527 SUPERFAMILY Cytochrome P450 91 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00886 Trre-Chr7 5905145 5910585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00886 17 527 Cytochrome P450 AT3G14690 51.859 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00886 - K24179 gmx:100801959 894.804