Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00875 ATGTTTGTGTTTCTGATTTTCATCATAAACACAATAGTCTTAGTAACATCAGCAGATCTAAAACCTGGGTATTACTCAAAAACATGTCCACAAGCTGAAACCATTGTCAGAGATGTTATGAAAAATTCTCTTAAGAAAGAACCAAGAAGTGTTGCCTCTATTATGCGTTTTCAATTCCATGATTGCTTTGTTAATGGGTGTGATGGTTCTTTGTTGCTTGATGATACACCAACTATGCTTGGAGAGAAATTGGCCCTTTCAAATATAAATTCACTTAGATCATTTGAAGTTGTTGATGAGATTAAGGAGGCATTAGAGAAGGCTTGCTCTGGAGTTGTTTCTTGTGCTGATATCATAATCATGGCCTCTAGAGATGCTGTTGCATTGACAGGAGGACCAGATTGGCAGGTGAAGTTAGGAAGATTGGACAGCTTAACAGCAAGTCAAGATAACTCAAGCGATATCATGCCAAGTCCAAGATCCAATGCAACCACTCTAATCAATCTCTTCCAAAAATACAACCTCAATGTGAAGGACCTTGTAGCACTCTCAGGATCACACTCTATCGGAAAAGCTCGTTGTTTTTCGATCATGTTTAGGCTATACAATCAATCCGGAAGCGGAAAGCCTGACCCTGCAATTGATCCTGGATTTAGAGCTGAGCTTGACAAGCTATGTCCACTAAATGTTGATCAAAATACGACAGGGAATCTCGATGCAACTCCGGTGATTTTCGATAATCAATATTTCAAGGATTTGATTGGTGGAAGAGGATTTCTTAACTCTGATCAAACACTTTTCACATTCCCTCAAACACAAGGGTTTGTTAGGCAATTTAGTATTGATCAAAATGAGTTTTTCAAAGCATTTGTTGAAGGAATGTTGAAATTGGGTGATTTGCAATCCGATAAACCTGGCGAGATTAGGAAGAATTGCAGAGTTGTCAATCCTCGCCCCGCGCCACATGTCCTGTATGAACACATGACGCAGAATAATGACTGA 1002 0.3932 MFVFLIFIINTIVLVTSADLKPGYYSKTCPQAETIVRDVMKNSLKKEPRSVASIMRFQFHDCFVNGCDGSLLLDDTPTMLGEKLALSNINSLRSFEVVDEIKEALEKACSGVVSCADIIIMASRDAVALTGGPDWQVKLGRLDSLTASQDNSSDIMPSPRSNATTLINLFQKYNLNVKDLVALSGSHSIGKARCFSIMFRLYNQSGSGKPDPAIDPGFRAELDKLCPLNVDQNTTGNLDATPVIFDNQYFKDLIGGRGFLNSDQTLFTFPQTQGFVRQFSIDQNEFFKAFVEGMLKLGDLQSDKPGEIRKNCRVVNPRPAPHVLYEHMTQNND 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00875 333 Gene3D - 23 316 - -
Trre7g00875 333 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 SUPERFAMILY Heme-dependent peroxidases 20 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 CDD secretory_peroxidase 20 315 IPR033905 GO:0004601|GO:0042744
Trre7g00875 333 Gene3D Peroxidase, domain 2 157 297 - -
Trre7g00875 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Trre7g00875 333 FunFam Peroxidase 157 297 - -
Trre7g00875 333 ProSiteProfiles Plant heme peroxidase family profile. 19 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 FunFam Peroxidase 23 166 - -
Trre7g00875 333 Pfam Peroxidase 36 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00875 333 PANTHER PEROXIDASE 72-RELATED 13 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00875 Trre-Chr7 5859558 5861349 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00875 4 319 Peroxidase AT2G22420 73.101 6.31e-179 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00875 K00430 - fve:101312090 516.153