Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00871 ATGCCAAGTCCAAGATCCAATGCAACCACTCTAATCAATCTCTTCCAAAAATACAACCTCAATGTGAAGGATCTTGTAGCACTCTCAGAATCACACTCTATCGGAAAAGCTCGTTGTTTTTCGATCATGTTTAGGCTATACAATCAATCCGGAAGCAGAAAGCCTGACCCTGCAATCGATCCCGGATTTAGAGCTGAGCTTGACAAGCTATGTCCACTAAATGTTGATCAAAATACGACTGGGAATCTCGATGTAACTCCGGTGATTTTTGATAATCAATATTTCCAGGATTTGGTTGGTGGAAGAGGATTTTTTAACTCTGATCAAACACTTTTCACATTCCCTCAAACACAAGGGTTTGTTAGGCAATTTAGTATTGATCAAAATGAGTTTTTCAAAGCATTTGTTGAAGGAATGTTAAAATTGCGTGATTTGCAATCCGATAAACCTGACGAGATTAGGAAGAATTGCATAGTTGTCAATCCTCGCCCTGCATCACATGTCCTGTATGAACACATGACGCAGAATAATGACCGATTGATATAA 546 0.3901 MPSPRSNATTLINLFQKYNLNVKDLVALSESHSIGKARCFSIMFRLYNQSGSRKPDPAIDPGFRAELDKLCPLNVDQNTTGNLDVTPVIFDNQYFQDLVGGRGFFNSDQTLFTFPQTQGFVRQFSIDQNEFFKAFVEGMLKLRDLQSDKPDEIRKNCIVVNPRPASHVLYEHMTQNNDRLI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00871 181 SUPERFAMILY Heme-dependent peroxidases 1 162 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre7g00871 181 PRINTS Plant peroxidase signature 81 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00871 181 PRINTS Plant peroxidase signature 23 35 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00871 181 PRINTS Plant peroxidase signature 97 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00871 181 FunFam Peroxidase 2 142 - -
Trre7g00871 181 Gene3D Peroxidase, domain 2 2 145 - -
Trre7g00871 181 Gene3D - 1 161 - -
Trre7g00871 181 Pfam Peroxidase 2 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00871 181 ProSiteProfiles Plant heme peroxidase family profile. 1 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00871 181 PRINTS Haem peroxidase superfamily signature 83 98 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00871 181 PRINTS Haem peroxidase superfamily signature 24 39 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00871 181 PANTHER - 1 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00871 Trre-Chr7 5846652 5847197 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00871 1 169 Peroxidase AT2G22420 68.047 2.39e-82 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00871 K00430 - fve:101299243 261.151