Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00870 ATGTTTATGTTTCTGATCTTCATCATCATAAACACAGTCTTAGTAACATCATCATCATCTGATCTAAAACCTGGGTATTACTCAAAAACATGTCCACAAGCTGAAATCATTGTCAGAGATGCTATGAAAAAAGCTCTTGCAAGAGAACCAAGAAGTGTTGCCTCTGTTATGCGCTTTCAATTTCATGATTGCTTTGTTAATGGGTGTGATGCTTCTATGCTGCTTGATGATACACCAACTATGCTTGGAGAGAAATTGGCCCTTTCAAATATAAATTCACTTAGATCATTTGAAGTTGTTGATGAGGTGAAAGAAGCTGTAGAGAAGGCTTGTCCTGGAATTGTTTCTTGTGCTGATATCATAATCATGGCTTCTAGAGATGCTGTAGCACTGACAGGAGGACCTGATTGGGAGGTGAAGTTAGGAAGGTTGGACAGCTTGACAGCTAGTCAAGAAGACTCGGACAACATCATGCCAAGTCCAAGAGCCAATGCGAGCACTCTCATCGATCTCTTCCAACGATTCAACCTCACTGTCAAAGACCTTGTAGCACTCTCAGGATCACACTCTATCGGCAAAGGTCGATGTTTTTCGATCATGTTTAGACTATACAATCAATCCGGTAGTGGAAAACCAGACCCTGCAATTGATCCCACTTTTAGACAAGAGCTTGACAAGCTATGTCCACTAGATGTTGATCAAAATAAGACAGGGAACCTTGATGCAACTCCGGTGATTTTCGATAATCAATATTTCAAGGATTTGGTTGGTGGAAGAGGATTTCTTAACTCTGATCAAACACTTTTCACATACCCTCGAACAAAGGGGTTTGTTAGGTTCTATAGTAGAGATCAAAATGAATTTTTCAAAGCATTTGTTGATGGAATGTTGAAAATGGGTGATTTACAGTCTGGTCGGCCTGGCGAGGTTAGGAGCAATTGCAGGGTTGCCAATGCTCGTCCAGCTAACATCCTGGTTGAACACAAGATGCAGAAAAATGTTAAATCAATATGA 1014 0.4053 MFMFLIFIIINTVLVTSSSSDLKPGYYSKTCPQAEIIVRDAMKKALAREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSFEVVDEVKEAVEKACPGIVSCADIIIMASRDAVALTGGPDWEVKLGRLDSLTASQEDSDNIMPSPRANASTLIDLFQRFNLTVKDLVALSGSHSIGKGRCFSIMFRLYNQSGSGKPDPAIDPTFRQELDKLCPLDVDQNKTGNLDATPVIFDNQYFKDLVGGRGFLNSDQTLFTYPRTKGFVRFYSRDQNEFFKAFVDGMLKMGDLQSGRPGEVRSNCRVANARPANILVEHKMQKNVKSI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00870 337 ProSiteProfiles Plant heme peroxidase family profile. 21 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 Gene3D Peroxidase, domain 2 159 299 - -
Trre7g00870 337 PANTHER PEROXIDASE 72-RELATED 17 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 FunFam Peroxidase 25 168 - -
Trre7g00870 337 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 CDD secretory_peroxidase 22 316 IPR033905 GO:0004601|GO:0042744
Trre7g00870 337 Pfam Peroxidase 38 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00870 337 FunFam Peroxidase 159 299 - -
Trre7g00870 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Trre7g00870 337 Gene3D - 25 318 - -
Trre7g00870 337 SUPERFAMILY Heme-dependent peroxidases 22 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00870 Trre-Chr7 5840730 5843175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00870 4 326 Peroxidase AT2G22420 73.684 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00870 K00430 - gmx:100796737 545.428