Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00868 ATGTCGCTAAACATGAAAACCCTAACCCAAGCACTAGCAAAAACCGCAGCAGTAATAGAAAAAACGGTTCAAACAACGGTTCAAGAAGTAACCGGTCCAAAACCACTTCAAGATTATGAGCTTCTCGATCAGATCGGTTCTGCAGGCCCGGGTTTAGCCTGGCGACTTTACTCGGCCCGTGCTCGTGATCCTTCTCGTCAACATCAGTATCCTGTTGTTTGTGTTTGGGTTTTGGATAAACGTGCTTTATCTGAGGCTAGGTTGCGTGCTGGATTGACGAAAGCTGCTGAGGATTCGTTTTTGGATTTGATTCGTACTGATGCTGGGAAGCTTGTTAGGTTAAGACATCCAGGGATTGTTCATGTTGTTCAGGGACTTGATGAGAATAAGAATGCCATGGCCATGGTTACCGAACCGTTGTTTGCTTCTGTTGCTAATACTCTTGGTTGTTTTGATAATGTTGCTATTGTTCCTAAAGATCTTAAGGGAATGGAAATGGGTCTGTTGGAGGTAAAACATGGTTTACTTCAGATAGCAGAATCGTTGGATTTTCTCCACAACCATGCTCATCTTATTCATCGAGCTATATCACCTGAGAATGTTTTTATCACATTAAGTGGAGCCTGGAAACTTGGTGGATTTGGTTTTGCAATTTCTTCTTCTCAGAACCCTGGTGACTCGTCTAATCTGCATGCCTTCCATTATGCTGAATATGACGTTGAAGACTCTGTTTTGCCACTTCAGCCATCAATTAATTACACTGCTCCTGAGATGGTGAGGAACACTGCTTCTTCAGCTGGGTGCTATTCTGATATTTTCAGTTTTGGATGTCTTGCCTACCATTTAATTGCTCGCAAGCCGTTGTTTGACTGCCACAACAATGTCAAGATGTACATGAATACCTTGACTTACTTATCCAGTGATGCTTTCTCATCTATCCCATCGGATCTGGTTCCTGACTTGCAAAGGATGCTCTCTTCAAATGAATCTTTCAGGCCAACTGCAATGGATTTTACAGGCTCACAATTTTTTCGGAATGACACTAGGTTACGTGCTCTGCGCTTCCTGGACCACATGCTTGAAAGAGATAACATGCAGAAGTCAGAGTTCTTAAAAGCATTGTCAGATATGTGGAAAGATTTTGATTCCCGTGTATTGCGATACAAGGTCCTTCCACCACTTTGTGCAGAACTTAGGAATGTAGTTATACAGCCGATGATTCTACCAATGGTTCTAACCATTGCAGAGTCTCAGGACAAGAATGATTTTGAGCAATCAACACTCCCAGCTCTTTTTCCTGTCTTAAGCACTGCTTCTGGTGATACAATGTTACTACTTCTAAAGCATGCCGAGCTAATAATAAACAAGACTAGTCAAGATCATTTAATTTCACATGTTCTTCCAATGATTGTTCGGGCCTATGATGATAATGATGCACGTTTACAAGAAGAGGTCCTAAAAAAATCAGTATCCCTTTCCAAGCAACTTGATGCCCAGCTGGTGAAACAAGTGATTTTGCCCCGTGTTCATGGACTAGCACTCAAAACAACAGTTGCTGCGGTTAGAGTCAATGCTTTGTTGTGCCTAGGAGACATGGTTAATCGACTTGATAAACATGCTGTCCTGGAAATCTTGCAAACTATTCAGCGCTGTACTGCTGTTGACCGTTCCCCTCCAACCCTTATGTGTACCCTCGGTGTTGCAAATTCTATTTTTAAGCAGTACGGAGTAGAATTTGTTGCTGAGCATGTTCTTCCATTGCTTATGCCACTCCTGACTGCTCAACAACTGAATGTTCAACAGTTTGCCAAATATATGCTCTTTGTCAAGAATATGCTCCAGAAGATAGAAGAGAAGCGAGGAGTTGCTGTGACTGATTCTGGAATGCCAGAGGTAAGACTATCTTCTGCGGTTAACGGCCTTCAGGTGGAAGCTCCAAGGACAAGCAACAGCACTGTTGCTGCTTCAACAAAAAGCAGCTCCTGGGATGCAGATTGGGGTCCCAAAACAACGGGAACCACCGATTCTGTCAAGAATTCTATTAATACATCCAGTCAATCTGTGATAGGCAACCCTGTGGGTCAAGTAACATCTTTACAAAATAATTTGTCCGTATCTGGTGTATCTAATCAGCAGACAGCCAAGTCATGTCCTTCAGTAGATTTAGAGTGGCCGCCTCGTGCATCTTCTGGTGTTACTTCACAATTTGGTGATACTGAAAGACAAACAGTTCCAGCAGGAACCTCATCCACGTCTAATCTTGAAGATGATGATCCTTTTGCCGATTGGCCTCCGCGCCCTAGTGGCTCATTATCTGGTGGAAATGGAAATTCCAACAATGGTACTATAGGAATGGCACTAAACAAGATGGGGCACAATTCAATGACAAGCAATTCAAGCAATCTTGGTTTCCAATCCAGCAACAGTTGGTCTGTCAACTCCCAAAATTCTGTGGAGTCTATCGTTATGAACCCAAGGAATTCTAGTTCATCTATTGGTAACCCGAATAATGGCTTTGAACCTCAGAGTTCTCTTGGGTTCCTAAAACAAAGTCAGGCTTTTCCAGCACCGAATGTTGTTTCATCATCATATAATAATAACGTTAAATCAACTGATCTTGGATCAATATTTTCTTCCAACAAGAATGAACAAATTGCACCTAGACTTGCGCCACCCCCTTCAACCACAGTGGGTAGAGGACGAGGAAGAGGGAGAGGAGCGACTTCAACCAAACAATCCTCTCATACCAAGTCAAGCACTGATCAGCCACCCCTTTTGGATTTGTTGGGGTAG 2793 0.4289 MSLNMKTLTQALAKTAAVIEKTVQTTVQEVTGPKPLQDYELLDQIGSAGPGLAWRLYSARARDPSRQHQYPVVCVWVLDKRALSEARLRAGLTKAAEDSFLDLIRTDAGKLVRLRHPGIVHVVQGLDENKNAMAMVTEPLFASVANTLGCFDNVAIVPKDLKGMEMGLLEVKHGLLQIAESLDFLHNHAHLIHRAISPENVFITLSGAWKLGGFGFAISSSQNPGDSSNLHAFHYAEYDVEDSVLPLQPSINYTAPEMVRNTASSAGCYSDIFSFGCLAYHLIARKPLFDCHNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQRMLSSNESFRPTAMDFTGSQFFRNDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQSTLPALFPVLSTASGDTMLLLLKHAELIINKTSQDHLISHVLPMIVRAYDDNDARLQEEVLKKSVSLSKQLDAQLVKQVILPRVHGLALKTTVAAVRVNALLCLGDMVNRLDKHAVLEILQTIQRCTAVDRSPPTLMCTLGVANSIFKQYGVEFVAEHVLPLLMPLLTAQQLNVQQFAKYMLFVKNMLQKIEEKRGVAVTDSGMPEVRLSSAVNGLQVEAPRTSNSTVAASTKSSSWDADWGPKTTGTTDSVKNSINTSSQSVIGNPVGQVTSLQNNLSVSGVSNQQTAKSCPSVDLEWPPRASSGVTSQFGDTERQTVPAGTSSTSNLEDDDPFADWPPRPSGSLSGGNGNSNNGTIGMALNKMGHNSMTSNSSNLGFQSSNSWSVNSQNSVESIVMNPRNSSSSIGNPNNGFEPQSSLGFLKQSQAFPAPNVVSSSYNNNVKSTDLGSIFSSNKNEQIAPRLAPPPSTTVGRGRGRGRGATSTKQSSHTKSSTDQPPLLDLLG 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00868 930 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00868 930 MobiDBLite consensus disorder prediction 728 756 - -
Trre7g00868 930 SUPERFAMILY ARM repeat 314 608 IPR016024 -
Trre7g00868 930 Pfam Protein kinase domain 108 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00868 930 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 36 918 - -
Trre7g00868 930 MobiDBLite consensus disorder prediction 906 923 - -
Trre7g00868 930 MobiDBLite consensus disorder prediction 645 692 - -
Trre7g00868 930 MobiDBLite consensus disorder prediction 824 844 - -
Trre7g00868 930 MobiDBLite consensus disorder prediction 710 800 - -
Trre7g00868 930 SUPERFAMILY Protein kinase-like (PK-like) 34 348 IPR011009 -
Trre7g00868 930 CDD PK_SCY1_like 45 346 - -
Trre7g00868 930 Gene3D Phosphorylase Kinase; domain 1 37 138 - -
Trre7g00868 930 MobiDBLite consensus disorder prediction 879 930 - -
Trre7g00868 930 MobiDBLite consensus disorder prediction 770 800 - -
Trre7g00868 930 Gene3D - 348 621 IPR011989 -
Trre7g00868 930 Gene3D Transferase(Phosphotransferase) domain 1 161 347 - -
Trre7g00868 930 SMART serkin_6 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00868 Trre-Chr7 5814297 5833126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00868 92 335 AGC Kinase Gene Family AT3G10540 23.790 6.22e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Trre7g00868 Pkinase 1.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00868 K17541 - gmx:100796211 1482.23