Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00835 ATGGCTAGTGTTACACATTCCATGGTGACATTCTTTGTATTATGTTTTATTGGTATAGTCTCATCTTCAAGTGTAATTCCTTCAGCAACTACTTTTGTGTCTTCTAATTTAACTGATCCTTATAGTGAGTTGAGCTCCACTTTTTATGTAACAAAGTGTCCTCTAGCTCTGCTTACCATTAAGGCATACATAACCGCTGTTGTATTGCAAGAACCTGACATGGGTGCTTCATTGCTTCGTCTTCATTTTCATGATTGTTTTGTTCAAGGTTGTGATGCATCAGTATTATATCTTAGCTGTTGCAGCTATAGAGATTCCGTTGTTGCTCTTGGTGGACCTGCTTGGCTAGTTCGTTTGGGTAGAAGAGATTCAACAACTGCAAATTTTAATGCTGCTAATTCTGATTTACCTGCTCCTTCTTTTGATCTTCCTGCCCTTATTAATGCCTTCAAGAAAAAGGGTTTCTCAGCTGATGAAATGGTTGTTTTGTTTTGTGCTCACACAATAGGAAAAGCAAAATGCACTTTATTCCGTGATAGGATTTACAACGAAAGCAACATAGAACCTAACTATGCGAAAACATTGCAAGGGTTCGTACCATGTCCAAAGAGTGGTGGCGATAACAACTTAGCTCCTTTTGATATCACAACTCCAACCTTCTTTGATAATACTTATTACAAAAATTTATTGAACAAAAAGGGTCTTTTGCACTCTGATCAACAACTCTACAATGGTGGTTCTACTGATTACAAAGTTTCAGCATACGCTAATAATCCATCACTCTTCAGTTTCGATTTCGCTAACGCGATGGTTAAGGTGGGAAATCTCAGTCCTTTAACCGGAAACCAAGGTCAAATCAGAAAATATTGCAGCAGAATGAATTGA 885 0.3774 MASVTHSMVTFFVLCFIGIVSSSSVIPSATTFVSSNLTDPYSELSSTFYVTKCPLALLTIKAYITAVVLQEPDMGASLLRLHFHDCFVQGCDASVLYLSCCSYRDSVVALGGPAWLVRLGRRDSTTANFNAANSDLPAPSFDLPALINAFKKKGFSADEMVVLFCAHTIGKAKCTLFRDRIYNESNIEPNYAKTLQGFVPCPKSGGDNNLAPFDITTPTFFDNTYYKNLLNKKGLLHSDQQLYNGGSTDYKVSAYANNPSLFSFDFANAMVKVGNLSPLTGNQGQIRKYCSRMN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00835 294 PANTHER PEROXIDASE 72-RELATED 42 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00835 294 SUPERFAMILY Heme-dependent peroxidases 44 294 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre7g00835 294 PRINTS Haem peroxidase superfamily signature 214 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00835 294 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00835 294 PRINTS Haem peroxidase superfamily signature 159 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00835 294 PRINTS Haem peroxidase superfamily signature 111 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00835 294 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00835 294 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00835 294 FunFam Peroxidase 137 273 - -
Trre7g00835 294 ProSiteProfiles Plant heme peroxidase family profile. 43 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00835 294 Gene3D - 44 99 - -
Trre7g00835 294 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Trre7g00835 294 Gene3D - 103 291 - -
Trre7g00835 294 Gene3D Peroxidase, domain 2 137 273 - -
Trre7g00835 294 CDD secretory_peroxidase 43 292 IPR033905 GO:0004601|GO:0042744
Trre7g00835 294 Pfam Peroxidase 104 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00835 294 Pfam Peroxidase 62 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00835 Trre-Chr7 5596232 5599218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00835 42 294 Peroxidase AT5G05340 46.801 1.09e-91 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00835 K00430 - qsu:112019242 308.916