Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00833 ATGTTCTTCCAAACATTAGTATTTGCAGCTCTTGCAACCACAACATTTTCAACACTCACAACAAATTACTATGACTACACATGTCCCAACGCTTTGAGCACCATTAGAAGTGTTGTGAAAGCCGCAGTTCAAAAAGAGAACCGTATGGGTGCTTCTTTACTACGCTTGCACTTTCATGATTGCTTTGTTAACGGTTGTGATGGTTCACTTCTTTTGGACTCTACACCTTCCATGGATAGTGAGAAAAATGCAAATCCAAATATCCAGTCAGCTAGAGGATTTGAAGTGGTAGATGCAATCAAGCAAGCTGTAGACGAAGCATGCGGGAAACCAGTTGTTTCTTGTGCAGATATATTGGCTGTTGCTGCAAGAGACTCTGTCGTTGAGTTAGGAGGACCATCATGGAATGTACGATTAGGAAGAAAAGACTCCAAAACAGCAAGTCGTGCCGATGCAGATGCAAACATCCCCGGACCATCCTTCAGTCTTTCTCAACTAATCAAAAACTTTGACAATCATGGCCTAAATGAAAAAGACCTTGTCGCCCTTTCTGGAGCACATACAATCGGATTCTCTCGTTGTCTTCTATTTAGGGACCGAATCTACAACGACAACAACATCAATGCTAACTTTGCACAACAACTTCAAAACATTTGTCCAAGAGAAGGTGGAGACTCCAACCTTACTCCTTTGGACAGTGTTACACCAGCGAAATTTGATGTGTCGTATTTCAGGGATTTGATTAAAAAGAAAGGGGTTCTTCATTCTGATCAGGAATTGTTGAATGGTGGTTATACTAGTGCTTTGGTTAAAAGATATAGGCAAAATACTCTAGCTTTCTATTATGATTTCGTGAAATCTATGGTTAAGATGGGAAATATTAAGCCACTTACTGGGAGTCAAGGTGAAGTTCGTTACAACTGTAGGAGAGCAAATTAA 939 0.4036 MFFQTLVFAALATTTFSTLTTNYYDYTCPNALSTIRSVVKAAVQKENRMGASLLRLHFHDCFVNGCDGSLLLDSTPSMDSEKNANPNIQSARGFEVVDAIKQAVDEACGKPVVSCADILAVAARDSVVELGGPSWNVRLGRKDSKTASRADADANIPGPSFSLSQLIKNFDNHGLNEKDLVALSGAHTIGFSRCLLFRDRIYNDNNINANFAQQLQNICPREGGDSNLTPLDSVTPAKFDVSYFRDLIKKKGVLHSDQELLNGGYTSALVKRYRQNTLAFYYDFVKSMVKMGNIKPLTGSQGEVRYNCRRAN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00833 312 FunFam Peroxidase 157 291 - -
Trre7g00833 312 Gene3D Peroxidase, domain 2 157 291 - -
Trre7g00833 312 CDD secretory_peroxidase 22 310 IPR033905 GO:0004601|GO:0042744
Trre7g00833 312 Gene3D - 22 309 - -
Trre7g00833 312 ProSiteProfiles Plant heme peroxidase family profile. 18 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Trre7g00833 312 PANTHER PEROXIDASE 72-RELATED 18 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 SUPERFAMILY Heme-dependent peroxidases 19 312 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 FunFam Peroxidase 22 165 - -
Trre7g00833 312 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 PRINTS Haem peroxidase superfamily signature 232 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 PRINTS Plant peroxidase signature 246 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 PRINTS Plant peroxidase signature 286 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 PRINTS Plant peroxidase signature 230 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00833 312 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Trre7g00833 312 Pfam Peroxidase 36 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00833 Trre-Chr7 5586026 5587415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00833 19 312 Peroxidase AT5G05340 60.811 6.76e-131 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00833 K00430 - gmx:100812820 459.529