Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00826 ATGGAACGAAGCGGAAGTGTGCTTATGCAACGATACGAAATAGGGAAATTATTAGGTCAAGGAACCTTTGCGAAGGTCTATCATGCAAGGAACCTTAAAAACGGCATGAATGTTGCTATCAAAGTTATTGATAAAGAAAAGGTTCTGAGGGTTGGGATGATCGATCAAATTAAACGTGAAATTTCAGTGATGAGACTCGTCAGGCATCCACATGTTGTTGAGCTTTACGAGGTAATGGCGAGCAAAACCAAAATTTACTTTGTTATGGAGTATGTAAAAGGCGGAGAACTCTTCAACAAGGTATCGAAAGGAAAACTAAAGCATGATGATGCAAGGAGATACTTTCAGCAATTGATCAGTGCCGTTGATTACTGTCATAGCAGAGGTGTGTGTCATCGCGATTTAAAACCAGAAAATCTTCTGTTGGATGAAAATGGAAATTTGAAGGTCTCGGATTTCGGATTAAGTGCACTTGCCGAGACTAAACACCAAGATGGATTACTCCATACTACATGTGGCACTCCTGCGTATGTCGCTCCGGAAGTGATACACCGCAAGGGATATGATGGGACTAAAGCTGATATATGGTCGTGTGGTGTGATCTTGTATGTTCTATTGGCCGGTTATCTTCCGTTTAGAGATCCGAATCTGATAGAGATGTACAGGAAAATCGGTAAGGCGGATTTCAAGTTTCCTAACTGGTTTGCATCGGATGTACGCAGATTGTTGTCGAAAATTCTGGATCCAAATCCAAAGAGCAGGATATCGATTACCAAAATTATGGAAAGTTCTTGGTTCAAAAAGGGGTTAGAGAAACCTATTGTTACCGACGCAGACAAAAAAGAACTAGCTCCTCTCGATGCTGATGGAGTATTCGGAGCTTGTGAGAATAGTGATCATGTTGATCTGTTGAAACCTTGTAACAATTTAAACGCTTTCGATATAATCTCATTTTCGTCAGGTTTTGACTTGTCCGGTTTGTTTGAGGAGAAAGAAAAAAAGACAGAAATACGGTTTACGTCTAACAAGCCTGCTTCAATCATCATCTCCAAATTTGAAGAAATTTGCAAGTGTCTCGTAAAACTGAAGAAAAAAGACGGAGGTTTGTTCAAGTTAGAAGGTTCGAAGGAAGGAAGAAAAGGACATTTAGGTATCGACGCAGAGATTTTTGAGATCACACCAATGTTCCATTTAGTTGAGTTGAAAAAGTCGAATGGAGACACGTTGGAGTACCAAAAGCTGTTGAAAGATAATGTTAGGCCTTCACTTAAGGACATTGTTTGGACATGGCAAGGAGAACAACCACAGCAATTGCAACATGGAATGGTGCAGAAAGAGGAACAGCCATCTTCCTAA 1356 0.4034 MERSGSVLMQRYEIGKLLGQGTFAKVYHARNLKNGMNVAIKVIDKEKVLRVGMIDQIKREISVMRLVRHPHVVELYEVMASKTKIYFVMEYVKGGELFNKVSKGKLKHDDARRYFQQLISAVDYCHSRGVCHRDLKPENLLLDENGNLKVSDFGLSALAETKHQDGLLHTTCGTPAYVAPEVIHRKGYDGTKADIWSCGVILYVLLAGYLPFRDPNLIEMYRKIGKADFKFPNWFASDVRRLLSKILDPNPKSRISITKIMESSWFKKGLEKPIVTDADKKELAPLDADGVFGACENSDHVDLLKPCNNLNAFDIISFSSGFDLSGLFEEKEKKTEIRFTSNKPASIIISKFEEICKCLVKLKKKDGGLFKLEGSKEGRKGHLGIDAEIFEITPMFHLVELKKSNGDTLEYQKLLKDNVRPSLKDIVWTWQGEQPQQLQHGMVQKEEQPSS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00826 451 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Trre7g00826 451 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00826 451 CDD STKc_SnRK3 11 265 - -
Trre7g00826 451 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Trre7g00826 451 FunFam Non-specific serine/threonine protein kinase 2 289 - -
Trre7g00826 451 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Trre7g00826 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Trre7g00826 451 CDD CIPK_C 311 424 - -
Trre7g00826 451 FunFam Non-specific serine/threonine protein kinase 305 428 - -
Trre7g00826 451 Pfam NAF domain 308 358 IPR004041 GO:0007165
Trre7g00826 451 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 424 - -
Trre7g00826 451 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00826 451 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Trre7g00826 451 Gene3D Transferase(Phosphotransferase) domain 1 3 306 - -
Trre7g00826 451 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00826 451 Gene3D Kinase associated domain 1, KA1 307 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00826 Trre-Chr7 5526419 5527774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00826 1 436 CBL-interacting serine-threonine protein kinases AT5G58380 65.495 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trre7g00826 Pkinase 5.5e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00826 K07198 - gmx:100815651 772.696