Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00821 ATGAGGAATAACAAGTTTAAGCTCTCAGATATGATTCCAAATGCTTGGTTTTACAAGCTAAAGGAAATAGGTAAAGGAAAAAACCAAACAACAACACCTTCTAAGAACAAACAACAACCTTCTTCATTAGCCTCAACAAAAACAACACATTCCTTAAAACAAAACCAACCAAATCAATGCAATCCTAGAAAATCATACTACTTCACAAGAGAACTTAACCAAAACAACACCAACAAATTTTTCACTTCACCAAAAACAACACAACCACAAACACCATCCAAAAACAGAACAAGAAAAAGAACAACTACAACATCAAAATCAAAATCAAAAACATGTTCTTCTTCACCAAAACATGTTACCCCATCTGTCTCTGCAGGTTGTAGTTGTCGAACTACACTTGAATCAGTGTGGACAAAATCAGATTCTCCACAAGAAAACTCTTCTTCATCTCTACTTGATAGTTTCACGGGGTCGGGGTCGGAATCCCCCGACCCAGAATTCAGAACAGACCGTGTTCTGATTCCAACTGAAACCTCTTCGGTTGACGAAATGGTTCCGTTGTCTACTTCTTCTTGTGCTTGCAACAAAATCTCCAACAACAACATTGATGATATTGTTATTGATGTTGACAAGAATTCTTTATCTAGAAAAGATGATAAACTTGAAAGGTATGATTATTCATATGATTCTTTTTCAAAGTTAGAACTTCCTCGTATCATTACAAAACCTCCCATGAAAAAAGAACACAAACCCATCAATGAAGAGTCTCTAAAGATTAAAATTTTGAACCAACAACAGCATCAAGAGAAGAAAAAGAAGAAGAAGAAAATTGGTTCTGCAAATTCTCCTGGATTAAAACTTCGTTTAAAGTCTCCAAGAATTGCTTCTACAAAGAAAGTTCAGTTTCATCATGGCCGAAAAAGCGTGACATCGTTGGCAACTTCCGGCTACCGGAGAAGCTTCTCCGGTAGCCTGGCAATAGTGAAATCATCTTTTAATCCTCAAAAGGATTTTAGAGAGTCTATGGTGGAGATGATTGTTGAGAATAACATAAGAGCATCTAAGGATTTGGAAGATCTTCTTGCTTGTTATCTTTCTTTGAATTCAGATGAGTATCATGATATTATTATCAAGGTTTTCAAGCAAATATGGTTTGATTTGACTGAAACAGGGTAG 1176 0.3588 MRNNKFKLSDMIPNAWFYKLKEIGKGKNQTTTPSKNKQQPSSLASTKTTHSLKQNQPNQCNPRKSYYFTRELNQNNTNKFFTSPKTTQPQTPSKNRTRKRTTTTSKSKSKTCSSSPKHVTPSVSAGCSCRTTLESVWTKSDSPQENSSSSLLDSFTGSGSESPDPEFRTDRVLIPTETSSVDEMVPLSTSSCACNKISNNNIDDIVIDVDKNSLSRKDDKLERYDYSYDSFSKLELPRIITKPPMKKEHKPINEESLKIKILNQQQHQEKKKKKKKIGSANSPGLKLRLKSPRIASTKKVQFHHGRKSVTSLATSGYRRSFSGSLAIVKSSFNPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDIIIKVFKQIWFDLTETG 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00821 391 MobiDBLite consensus disorder prediction 264 285 - -
Trre7g00821 391 MobiDBLite consensus disorder prediction 138 163 - -
Trre7g00821 391 MobiDBLite consensus disorder prediction 76 125 - -
Trre7g00821 391 MobiDBLite consensus disorder prediction 138 170 - -
Trre7g00821 391 MobiDBLite consensus disorder prediction 76 98 - -
Trre7g00821 391 ProSiteProfiles OVATE domain profile. 327 386 IPR006458 -
Trre7g00821 391 MobiDBLite consensus disorder prediction 26 63 - -
Trre7g00821 391 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Trre7g00821 391 Pfam Transcriptional repressor, ovate 331 387 IPR006458 -
Trre7g00821 391 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 56 388 IPR038933 GO:0045892
Trre7g00821 391 MobiDBLite consensus disorder prediction 106 125 - -
Trre7g00821 391 NCBIfam uncharacterized plant-specific domain TIGR01568 326 388 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00821 Trre-Chr7 5492141 5493316 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre7g00821 Ovate 2.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00821 - - cam:101506553 417.927