Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00820 ATGTATAAGGGAAGAATAGGAGGCAAAGCTCATCCTGGATATGTTGAAACTGATCCTTCAGGTCGATATGGACGTTTTAGGGATGTCCTTGGCAAAGGAGCAATGAAGGTAGTTTATAGGGCATTTGATGAAATCCTAGGAATAGAAGTGGCTTGGAACCAAATCAAGCTTGATGATGTCTTTCATTCACCGGACCAACTTCAACGCCTCTATTCAGAGGTTCATCTCCTAAAAAACTTGGATCATGATTCTATCATTACTTTCCATGGTACTTGGATTGATTCTGATTGTAGAACTTTCAACTTCATCACTGAATTGTTCACCTCCGGAACCCTAAGAGAGTATAGAAAGAAGTACCCTCGTGTAGATATGAGAGCAATAAAGAATTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTATTTGCATAGCCATGATCCTCCTGTGATACATAGAGACCTAAAGTGTGATAATATATTTGTTAATGGCCATATGGGTAAACTCAAGATTGGTGATTTAGGCCTTGCAGCAATTCTTCGTAGTTCACAACATGCACACAGTACACCAGAGTTTATGGCACCAGAATTGTATGAAGAGGAATATACTGAGTTGGTAGACATATACTCTTTTGGCATGTGTATGATTGAGTTGTTCACTTCTGAGTTCCCATATAGTGAATGCTCCAACCCAGCTCAAATATACAAGAAAGTTACATCTGGGAAACTACCAGCTGCATTTTACAAGATCCAAGATTTAGAAGCCCAAAAGTTTGTTGGGAAATGTTTGGCAAATGTAACAGTGAGGTTGTCAGCAAAAGAGCTTTTGTTGGACCCATTTTTAGCCACGGCCCAATGTGATTCACCATTGCCTAGTCCAACATTACCTAGCAAACATTCTCAAAAACTCAATTTCAATGCAACAATGGCCAAAGAGCAACCTTCATTGAATGTTCAAACAAAGAGCACACATATGACAATCACAGGGACTATGAATGAAGAGGATGACAATGTTTTCCTTAAAGTCAAAATTTCAAACAAAAATGGGCACACAAGAAACATATACTTTCCATTTGACATAAGAAATGACACTGCAATTGAGGTTGCAAATGAGATGGTCAAAGAACTAGAAATTATTGACTTAGAACAACAAGAGATTGCTGAAATGATTGAAGAAGAAATATCAACTATAGTTCCAACATGGAGGGGTTTTGACACTTCTAAGTATCAAAGACATCATAGTTTTAATTATGGAGAAGAGGATGATATTAGTAATCATAATCCTTTCTTCTCACCATCTTCTCGTTCTTCATCTCATGGTTCTCTTCCTATGTTTTGTGCTTCCTTCAACAACAATACACACCTTTGTGGGAACCATTATCCTTTTCCTCAAGATTGGTCACAAGATGATCACCAATACATGAATGATGATGCAAGCTCTCAAAGCTCAATCAATTCCTACAAGTGTTTCAATTTCCATTGCAACGACTCATGCAATGAAGATGAACAAGGTTCAACTCATATAGTAGGAGAAGAACCCTTTTGTTCCAATCAAAAGGGTAACAACAAATCAACAAGATTTTGTCCTCCAGAAGAAATGTTGGAGGTTGGTTTCATCAAACAGTTTTCCAATATGAGAATGAATTCTCACACTCACACTCATAAGAATCATCATGGACCAAACAATAGATGTCCAAGTCCAAGGTTGACAAGGATTAATTCATGTCTTGATGTGAAGAAACAACAACGATCATTGATGGAAGAGATGCAAAAGAGAAGGGTGTTCAATACAGTGAGTGCTATTGAGAATATTGGATTTCAAAATCCAGAAGGAGATGGATGTTTTTCTTGTTGA 1848 0.3777 MYKGRIGGKAHPGYVETDPSGRYGRFRDVLGKGAMKVVYRAFDEILGIEVAWNQIKLDDVFHSPDQLQRLYSEVHLLKNLDHDSIITFHGTWIDSDCRTFNFITELFTSGTLREYRKKYPRVDMRAIKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFVNGHMGKLKIGDLGLAAILRSSQHAHSTPEFMAPELYEEEYTELVDIYSFGMCMIELFTSEFPYSECSNPAQIYKKVTSGKLPAAFYKIQDLEAQKFVGKCLANVTVRLSAKELLLDPFLATAQCDSPLPSPTLPSKHSQKLNFNATMAKEQPSLNVQTKSTHMTITGTMNEEDDNVFLKVKISNKNGHTRNIYFPFDIRNDTAIEVANEMVKELEIIDLEQQEIAEMIEEEISTIVPTWRGFDTSKYQRHHSFNYGEEDDISNHNPFFSPSSRSSSHGSLPMFCASFNNNTHLCGNHYPFPQDWSQDDHQYMNDDASSQSSINSYKCFNFHCNDSCNEDEQGSTHIVGEEPFCSNQKGNNKSTRFCPPEEMLEVGFIKQFSNMRMNSHTHTHKNHHGPNNRCPSPRLTRINSCLDVKKQQRSLMEEMQKRRVFNTVSAIENIGFQNPEGDGCFSC 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00820 615 Gene3D - 335 400 - -
Trre7g00820 615 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Trre7g00820 615 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 586 - -
Trre7g00820 615 Pfam Protein kinase domain 28 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00820 615 Gene3D Transferase(Phosphotransferase) domain 1 107 285 - -
Trre7g00820 615 SUPERFAMILY Protein kinase-like (PK-like) 26 322 IPR011009 -
Trre7g00820 615 SMART serkin_6 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00820 615 FunFam probable serine/threonine-protein kinase WNK9 107 284 - -
Trre7g00820 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Trre7g00820 615 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Trre7g00820 615 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00820 Trre-Chr7 5455534 5461366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00820 13 423 MAP Kinase Kinase Kinase AT3G51630 67.470 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Trre7g00820 Pkinase 7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00820 K08867 - gmx:100170673 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01810 13 15420101 15424271 Trre7g00820 7 5455534 5461366 PCT