Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00799 ATGGGATGTTTCCTTGTCTTCAAGAACTTGAAGAAAAAGTATGAAAAATACAAATCAAAAAATAGCAGGAATAATGAGCATGTATCTACAACAATGCCTCGTCTTCAAGCTTCTCGCTCATTGCACTCCGATCCTCCAATTTTGAGGCATAGCATGATTTCCAATAACCTGATTAACCGAGTTAAAAACAACATAACAAGAGTGTTATCTGCTCCATCAGCTCTTGATGCTGCAGAACAAGGAGCTCTAGCCTCAATTAAGAAGGATGAACAAGAAATGCTGGATGTTCCAGCAAGAATAATAAAGGAGCCGCATTCACCTATTCCACAACCTTTACCTCTTCCACAACCTTTACCTCTTCCACCTCCTCAAGGAAGTAGTCCATTGGCATTAAGGATGGCTAGGAGTCCTTTATATTCTTCTGGCCCGGCTCTTGATGCAGCAAAACAAGATGGTTTGGAAACATTTCGGTATGAAGAAAAAGAATGGTATAGAAACCGAGATAGATTGATGAAGGCAAGACCTTTACCGCTTCCACCTCTTCAAGAAACAAGTCCAATGAAGGCTGCTAGCAGCTCTAAGTCAGGAAAAGCTATTGATACGGTTCTTTATTTTCAATATGAGAAGATTGCTGCTGCTTGCCACAACTTCTCTATATATCGACGCATGTCAGAATCTCTTTCTTCCACCATGTATAAAGCTTCCTTTGATCATGAAGCTTCAAGCAAGAAGCTTAAAGCCACTGTCACACGCCTTCACCAATCAACTCAGGGGTTGAGGGAATTCATGAATGAGGTTAATACTCTTGCAAATTTGCAACATCCAAACCTTTGTAAACTGCTCGGATTTTATGCAAGCGAAAGCTCTGAACCAAGGATGTTGGTTTATGAGAGGCTGAGCAACGGGAGCTTGGACCGTCTGTTGTTTGGGAAATCTGCCGGCCCTTCAATTGATTGGAACACAAGAATAAAAATCGCCATCTGTGCTGCACAGGCTCTTACTTTCTTGCATGAAGAAGGGCCTCTCCAGGCAATGTATAATGATTTTTCAGCAGTGAACATACAGGTCGACATGGATTTCAATGCAAAGCTTTCAGGATATGGTTTTGTTGGAAGTGTTGCTGAGAGAGAGCTTTCAAGAAGTTCACATGCGGCAGCAAACCTTTCGGTGGAGACATTGGAAAAAGGACTGCTTACTCCAAAGAGCAATGTATGGAGTTTTGGAATTGTTCTTCTGGAGCTACTTACTGGAAGAAAGAATTTTGATAGGAAATTCCCAAAGAAAGAGAGAAACTTAGTCAAGTGGTGCAGGCCTTACCTAGCAGACAATTTCCAGTTGTCAGTGATCATGGATTCTCAACTCAAAGGTCAGTTTTCACTCAAGGCTGCAAGAACATTAGCTAGCATTGTACAAAGATGCCTCCAAAGGGAGCCATCAGAAAGACCAACCATGAGAGCCATTCTTGAGAATCTCAAAACCATACCAGATATGAAGTACCCTAGTTTATTCCCACTGCAAGAGCCAGCAGCCATCCATGGACAACACATGCCGAGATCACCACGTGTTGATGGCATCATTAATGCACCTAGATTGGGTTTCTCCCCATTACTACCATCAGCTCTCAGAACATCTATGTTACATCCTCCAAGATGGTCTGGTGTGCCCACAAAGCTTCCTTCTCCTCTTGGTTGTTCCTCGGCTGTCTCTACTGAAGAACTCACTAGGCAGGAAAGTACACCGTCACTATCCTCGGTAAACAAGAAAGCTTAG 1770 0.4271 MGCFLVFKNLKKKYEKYKSKNSRNNEHVSTTMPRLQASRSLHSDPPILRHSMISNNLINRVKNNITRVLSAPSALDAAEQGALASIKKDEQEMLDVPARIIKEPHSPIPQPLPLPQPLPLPPPQGSSPLALRMARSPLYSSGPALDAAKQDGLETFRYEEKEWYRNRDRLMKARPLPLPPLQETSPMKAASSSKSGKAIDTVLYFQYEKIAAACHNFSIYRRMSESLSSTMYKASFDHEASSKKLKATVTRLHQSTQGLREFMNEVNTLANLQHPNLCKLLGFYASESSEPRMLVYERLSNGSLDRLLFGKSAGPSIDWNTRIKIAICAAQALTFLHEEGPLQAMYNDFSAVNIQVDMDFNAKLSGYGFVGSVAERELSRSSHAAANLSVETLEKGLLTPKSNVWSFGIVLLELLTGRKNFDRKFPKKERNLVKWCRPYLADNFQLSVIMDSQLKGQFSLKAARTLASIVQRCLQREPSERPTMRAILENLKTIPDMKYPSLFPLQEPAAIHGQHMPRSPRVDGIINAPRLGFSPLLPSALRTSMLHPPRWSGVPTKLPSPLGCSSAVSTEELTRQESTPSLSSVNKKA 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00799 589 Gene3D Phosphorylase Kinase; domain 1 182 297 - -
Trre7g00799 589 SUPERFAMILY Protein kinase-like (PK-like) 198 501 IPR011009 -
Trre7g00799 589 Gene3D Transferase(Phosphotransferase) domain 1 299 501 - -
Trre7g00799 589 ProSiteProfiles Protein kinase domain profile. 217 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00799 589 MobiDBLite consensus disorder prediction 562 589 - -
Trre7g00799 589 MobiDBLite consensus disorder prediction 24 38 - -
Trre7g00799 589 PANTHER OS01G0588500 PROTEIN-RELATED 182 493 - -
Trre7g00799 589 MobiDBLite consensus disorder prediction 19 42 - -
Trre7g00799 589 MobiDBLite consensus disorder prediction 552 589 - -
Trre7g00799 589 Pfam Protein tyrosine and serine/threonine kinase 226 491 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00799 Trre-Chr7 5284459 5286834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00799 204 494 Receptor kinase-like Gene Family AT4G02010 35.216 1.84e-48 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Trre7g00799 PK_Tyr_Ser-Thr 2.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00799 - - aprc:113849641 583.178