Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00797 ATGGAGTCAAGGTGTTGCATGAACGTGTTATGTGGTACATCTACGTCGATTCGGTGGCGTAAAGGTTGGCTACTTCGATCCGGTGAATTCGCCGATCTATGTGATAAGTGCGGTTCTGCTTATGATCAATCGGCATTTTGTGATATTTTCCATGCAAAAGATTCTGGTTGGAGAGAGTGTACTTCATGTGGCAAGCGTCTCCATTGTGGATGTGTTGCTTCAAAGTCACAGCTTGAAATACTTGATACTGGTGGTGTAAGCTGTATAACCTGCACAAGTAATTCAGGACTTCAACCAATTACTGGTAATGAAAAGCCTAATGAATCAGAGACAGCAAAGGTAAAACATGTCAGTATGCAGCAATACATATCTCTGGCTAACCAATTAAATGCAAGGGGTATGCAAGTTGGGAATTATACAGAAAATGATGGACTGAGGTGCTGGCTCAAACCTCGCAATGTTGATATGGATGGACCTTCTACAGAAATCAAACCAGAAGTTTTACCCTCTGTCGGAGAATTTGGAAGCACTTTGGTATCACAATTTCATCGTGAGTCAAATGGATCGTCTAGGACTCCCAAAGGAGAGAATTATAAGGCAGGCGACATGCAAGATATATATGAATCACTGGCGCAAACAAATTTGAGTACGACCCTTGCCGCTCCTTTGGAAAATTCGAATCCCTTTCACAATGTCCTTGTTGATGAAAGAGAACAAAGCAAAATGTCACCTCCGCTTCTATTGGCGTCTAGATCTCGCCATCTTTTACCTAAACCCCCTAGGCCAACTCTCTCTTCAGGCTTAGAAGCAAATGTAGGTATGGTATCCCAGGTTCGTATAGCAAGGCCTCCCGCCGAAGGACGAGGAAGGAATCAGTTGCTTCCGCGATATTGGCCTAGAATTACAGATCAAGAGTTGCAGCAAATATCGGGAGATTCAAATTCCACCATCGTGCCACTCTTTGAAAAGATGCTTAGCGCAAGTGATGCTGGTCGAATTGGTCGCTTAGTTCTCCCAAAAGCATGTGCTGAAGCATATTTCCCTCCTATCTCTCAACCCGAGGGCCTTCCTTTGCGAATCCAGGATGTGAAAGGAAAAGAATGGATGTTTCAATTTAGATTTTGGCCAAATAATAACAGCAGGATGTATGTTTTAGAAGGCGTAACGCCCTGTATCCAGTCTATGCAACTACAAGCTGGGGATACTGTAACATTTAGCCGTATGGACCCTGAGGGGAAACTTATAATGGGGTTCAGGAAGGCAACAAATTCTGCTTCAGTACAGGAAACTTTTCCGTCTAATAAGCCCAATGGTTCTCATTCAAGTGAAACTTCCTATTCTGGTGTTTATGAGAATTTACCTATATTAAGTGGTTACTCTGGCCTTCTTCAGTCTCAAAAGGGATGTTCAGAAACCCACCTAAATGTGCTGTCTAAAAAGTGGAACTCAGTTGGTGGTGACATGGATTGGCATAATGTAGAAATGCCCGAAAGCAGGAAAAGAGATGCCTTGTCTTTGCCACCTGTGCTGGTTCCCGAGAAGAAAAGAACTCGGAATATTGGGTCAAAAAGTAAGAGGTTGCTTATTGATAGCCAGGATGCACTGGAGCTCAAACTTACTTGGGAAGAGGCTCAAGATTTACTTCGTCCACCTCCAGAAGTTAAGCCAAGTGTTGTCATGATTGAGGATCACTTATTTGAAGAATATGAAGAACCTCCTGTCTTTGGGAAGAAGAGTATTTTTGTGGTACGATCTAATGGGATAAATGAGCAGTGGACACAGTGTGATAGTTGCTTAAAATGGCGGAAGTTACCAGTTGATGTACTTATTCCCCCTAAGTGGACGTGTATGGAGAATTTTTGGGATCAAAGCAGGTGTTCATGTGCTGCTCCCAATGAATTGAACCCAAGAGAACTGGATAATCTTTTGAGAATGAACAAAGAATTCAAGAAACAAAGACTAGCAGCAGCAAGCCAGAGGCCAGCTCTGGAACATGAATCTTCTGGTCTTGATGCTTTGGCAAATGCTGTTGTACTTGGAGATGATGCAAGTGAATCTGGTACGACGCCAGTCATGACCACTACAAAACATCCTCGTCATAGACCTGGGTGCTCCTGCATTGTCTGTATCCAGCCACCAAGTGGGAAGGGCAAACACAAACCTACATGCACTTGTAACGTCTGCATGACAGTTAAGCGTCGGTTTAAAACCCTGATGATGCGAAAGAAGAAACGTCAATCTGAGCGTGAAGCTGAGATTGCTCAGAAAAATCAGCTATCATATAGGGCCAAGGACGAATCAGAAGTAGACAGCACCTCTCGACATTTAACTCCAGTTGATGGTTCAACTTCAGATAATGAAGCAAGGTTGCCAAATGAGTTGGATTCAAAGATTCAAGACCAAGTGGCTGAAGCTGCCACGGGACAATTAGACTTGAATTGCCAACCGGACCGGGATGACATGCAAGCTGGACCAAACACTCTGAGCATGATGACTCTTCTTGAAGAAGCAAATCTCCCATTGGAGACATACCTGAAGCAAAATGGTCTTTCTAGCTTGATATCAGAGCAGCAAACAAATTCAGCTTCAAATGTGCAGGCACAAACAACCAATGAGAGTGAGGGAAGACAAAATGAGGATTGCAATACTGCTTCTGTAGTTCATGAACAGGAAGGCAGTCCTGAAGAAAACAGCGGGCAAGACCGAGACCAAAACAATTCACTTTCTTGA 2730 0.4352 MESRCCMNVLCGTSTSIRWRKGWLLRSGEFADLCDKCGSAYDQSAFCDIFHAKDSGWRECTSCGKRLHCGCVASKSQLEILDTGGVSCITCTSNSGLQPITGNEKPNESETAKVKHVSMQQYISLANQLNARGMQVGNYTENDGLRCWLKPRNVDMDGPSTEIKPEVLPSVGEFGSTLVSQFHRESNGSSRTPKGENYKAGDMQDIYESLAQTNLSTTLAAPLENSNPFHNVLVDEREQSKMSPPLLLASRSRHLLPKPPRPTLSSGLEANVGMVSQVRIARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWMFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKATNSASVQETFPSNKPNGSHSSETSYSGVYENLPILSGYSGLLQSQKGCSETHLNVLSKKWNSVGGDMDWHNVEMPESRKRDALSLPPVLVPEKKRTRNIGSKSKRLLIDSQDALELKLTWEEAQDLLRPPPEVKPSVVMIEDHLFEEYEEPPVFGKKSIFVVRSNGINEQWTQCDSCLKWRKLPVDVLIPPKWTCMENFWDQSRCSCAAPNELNPRELDNLLRMNKEFKKQRLAAASQRPALEHESSGLDALANAVVLGDDASESGTTPVMTTTKHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQKNQLSYRAKDESEVDSTSRHLTPVDGSTSDNEARLPNELDSKIQDQVAEAATGQLDLNCQPDRDDMQAGPNTLSMMTLLEEANLPLETYLKQNGLSSLISEQQTNSASNVQAQTTNESEGRQNEDCNTASVVHEQEGSPEENSGQDRDQNNSLS 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00797 909 SMART B3_2 321 421 IPR003340 GO:0003677
Trre7g00797 909 MobiDBLite consensus disorder prediction 741 794 - -
Trre7g00797 909 Gene3D - 589 645 - -
Trre7g00797 909 FunFam B3 domain-containing transcription repressor VAL1 299 426 - -
Trre7g00797 909 CDD B3_DNA 319 420 IPR003340 GO:0003677
Trre7g00797 909 Pfam CW-type Zinc Finger 591 633 IPR011124 GO:0008270
Trre7g00797 909 ProSiteProfiles Zinc finger CW-type profile. 586 636 IPR011124 GO:0008270
Trre7g00797 909 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 861 - -
Trre7g00797 909 MobiDBLite consensus disorder prediction 759 773 - -
Trre7g00797 909 Pfam B3 DNA binding domain 321 420 IPR003340 GO:0003677
Trre7g00797 909 MobiDBLite consensus disorder prediction 856 909 - -
Trre7g00797 909 ProSiteProfiles B3 DNA-binding domain profile. 321 422 IPR003340 GO:0003677
Trre7g00797 909 MobiDBLite consensus disorder prediction 774 789 - -
Trre7g00797 909 SUPERFAMILY DNA-binding pseudobarrel domain 318 420 IPR015300 -
Trre7g00797 909 Gene3D - 299 426 IPR015300 -
Trre7g00797 909 MobiDBLite consensus disorder prediction 426 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00797 Trre-Chr7 5275553 5282683 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00797 1 884 B3 DNA Binding Superfamily AT4G32010 48.931 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre7g00797 B3 1.4e-15 CL0405