Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00793 ATGCAAAATCAATTCATCATCATCATCATCCTATCTTTGTTTCTTTTTCTTTTTAATCCATTCCTAGTGATCTCACTATACCAACCTTTCAATGAAGACATGTTAGGGTTGATTGTGTTCAAAGCGGGTTTAGAAGATCCAAAAAACAAACTTTCTTCTTGGAATGAAGATGATTATAGTCCTTGCAATTGGGAAGGTGTCAAATGTGACCCTACAACAAATAGGGTATCTTCTCTTGTTCTTGATGGATTCTCTCTTTCAGGACATATTAGTAAAAGCCTTATGAGATTGCAGTTCCTTCAAATTCTTTCACTTTCTAGGAACAACTTCACAGGGAAAATAAACCATGACCTTCTTCTTACTCTTTGGAATCTAAAAGTTGTTGATTTGAGTGAAAATAGTTTGTATGGTACAATTCCGGATGAACTTTTTCGACAATGTTGGTCGTTAAGAGTTTTATCGCTCGCGAAAAACAATCTCTCGGGTACGATTCCTGACTCTTTGAGTTCATGCTTCTCGTTAGCAAGTTTGAACTTTTCGTCTAACCGATTAACTGGTGAGTTACATTATGGAATGTGGTTTTTGAAGGAACTGCAATCGCTTGATCTCTCGAATAATTTGCTCGAAGGAGAGATTCCTGAAGGAATTCAAAATCTATATGATTTGAGAGAGTTAAGGCTAAGGAGGAACTTTTTCACCGGTAGGATACCGGAGAGTATAGGAAACTGTTTGCTTTTGAAGTTGATCGATTTCGGTGATAATTTTCTAAGTGATGGAATTCCGGAGTCGATACAAAGACTCACCTCAAGCACATTTTTAAGTTTGCAAAGGAATTCTCTCAATGGAAGCATTCCACATTGGATAATAGAATTGAACAATCTTGAAATATTGGATCTTTCTTCTAATAGATTTTTTGGTTTGATTCCAAATGGTATTGGTGGTCTTAGAAGCTTGCAAGTGTTGAATTTTTCAAACAACAATATCTTTGGTTCTATTCCAGTGAGTATAAGAGAGCTTAAATCTTTGTATATACTTGATTTGAGTGATAACAAAATTAATGGAAGCATTCCTTGTGAAATAGAAGGAGCAATTTCACTTAATGAATTGAGGTTACAAAGAAATTTGTTAGGTGGAAGAATTCCAGTCCAAATTTCAAAATGTTCAGCACTCACATCTATGAATCTTGCACACAACAAGCTTATTGGTTCAATCCCTTCATCAATAGCAGACCTAACAAATCTTCAACATGCAGATTTTTCATGTAACAAACTCACTGGAACTTTACCTAAAAAGCTCACAAATCTTACACATCTTTCCTCATTCAATGTTTCCTATAACAATCTTCAAGGTGAATTACCAATTGGTGGATTCTTCAAAAAAATCTCTCCTTCATTTGTTTATGGAAATCCATTGTTATGTGGTTCTATTGTTAACCACTCTTGTTCATCTTATCATCCAAAACCTATTGTCTTAAACCCTAATTCAAATTACAACAATTCAAGAACTTCATTACAAAACCATCATCATCATAAGATAATACTTAGTATATCTGTTTTTATTGCTATTGGTGGAGCTATTTCTATTGTTGTTGGTGTTATTGTTGTTACTTTTTTGAATATTCATGTTAGGTCTTCAAATTCACATTATGATCCTCCATTTGGATTACCCGGTGGTAAGGACTATAGATCTTCGCCTGAAAAAGATCCGAAATGTGGAAAAGTTGTGATGTTTAATGGTGATGTTGAATTTACCGATGAGCCGAATAATCTTCTTAAAGAAGGTAATGAAATCGGCCGCGGTGGATTTGGAATTGTTTATTGTGTTGTCCTTCGAGATCAGAAGTCTGTTGCAATCAAGAAGCTTATAGGTTCGAGTTTGACAAAGTCACATGATGATTTTGAGAAAGAGGTTCAAAAACTTGGAAAAATTAGACATCAAAATCTTGTGGCACTTGAAGGGTATTATTGGAATTCAACATTTCAGCTTATTATTTATGAGTACTTTTCTAGAGGGAATTTGCATAAGCTTCTTCATGATGATAATAGCAAAATTGTGTTTTCTTGGAGTGCAAGGTTCAAGGTTATTTTAGGAATTGCAAAAGGGTTGGCCTATTTACACCAAATGAACATAATTCATTATAATATGAAATCTACTAATGTTTTCATTGATTTTTGTGATGAACCAAAAATAGGAGATTTTGGTTTGGTGAATCTATTGCCAATTCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTTGGATACACGGCTCCCGAGTTTGCTTGTCGAACGGTTAACATAACCGAAAAATGCGACGTATATGGTTTTGGAATTTTGGTTCTAGAAATTGTGAGTGGAAAAAAACCAGTGGAATATATGGATGATGATGTTGTTGTTCTATGTGACATGGTTAGGAGTTCATTGGAGGATGGAAAAGTTGAGCAATGTATTGATGAGAAACTTGTTGGTAATTTTTCGCCCGAGGAAGCGATTCCTTTGATTAAATTAGGGTTAGTTTGTTCATCGCATGTACCATCAAATCGTCCGAATATGGCTGAGGTTGTTAACATATTAGAGACGATTGAATGCTCTTTGGAAGGACAACAAGAGGAATTACAATAA 2628 0.3482 MQNQFIIIIILSLFLFLFNPFLVISLYQPFNEDMLGLIVFKAGLEDPKNKLSSWNEDDYSPCNWEGVKCDPTTNRVSSLVLDGFSLSGHISKSLMRLQFLQILSLSRNNFTGKINHDLLLTLWNLKVVDLSENSLYGTIPDELFRQCWSLRVLSLAKNNLSGTIPDSLSSCFSLASLNFSSNRLTGELHYGMWFLKELQSLDLSNNLLEGEIPEGIQNLYDLRELRLRRNFFTGRIPESIGNCLLLKLIDFGDNFLSDGIPESIQRLTSSTFLSLQRNSLNGSIPHWIIELNNLEILDLSSNRFFGLIPNGIGGLRSLQVLNFSNNNIFGSIPVSIRELKSLYILDLSDNKINGSIPCEIEGAISLNELRLQRNLLGGRIPVQISKCSALTSMNLAHNKLIGSIPSSIADLTNLQHADFSCNKLTGTLPKKLTNLTHLSSFNVSYNNLQGELPIGGFFKKISPSFVYGNPLLCGSIVNHSCSSYHPKPIVLNPNSNYNNSRTSLQNHHHHKIILSISVFIAIGGAISIVVGVIVVTFLNIHVRSSNSHYDPPFGLPGGKDYRSSPEKDPKCGKVVMFNGDVEFTDEPNNLLKEGNEIGRGGFGIVYCVVLRDQKSVAIKKLIGSSLTKSHDDFEKEVQKLGKIRHQNLVALEGYYWNSTFQLIIYEYFSRGNLHKLLHDDNSKIVFSWSARFKVILGIAKGLAYLHQMNIIHYNMKSTNVFIDFCDEPKIGDFGLVNLLPILDHCVLSSKIQSALGYTAPEFACRTVNITEKCDVYGFGILVLEIVSGKKPVEYMDDDVVVLCDMVRSSLEDGKVEQCIDEKLVGNFSPEEAIPLIKLGLVCSSHVPSNRPNMAEVVNILETIECSLEGQQEELQ 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00793 875 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 84 860 - -
Trre7g00793 875 FunFam Inactive leucine-rich repeat receptor-like protein kinase 192 286 - -
Trre7g00793 875 SUPERFAMILY L domain-like 33 268 - -
Trre7g00793 875 FunFam Leucine-rich repeat receptor-like protein kinase PXC2 290 484 - -
Trre7g00793 875 SMART LRR_typ_2 219 243 IPR003591 -
Trre7g00793 875 SMART LRR_typ_2 435 459 IPR003591 -
Trre7g00793 875 SMART LRR_typ_2 195 218 IPR003591 -
Trre7g00793 875 SMART LRR_typ_2 291 314 IPR003591 -
Trre7g00793 875 SMART LRR_typ_2 122 146 IPR003591 -
Trre7g00793 875 SMART LRR_typ_2 315 339 IPR003591 -
Trre7g00793 875 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 585 667 - -
Trre7g00793 875 ProSitePatterns Protein kinases ATP-binding region signature. 597 620 IPR017441 GO:0005524
Trre7g00793 875 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 30 191 - -
Trre7g00793 875 PRINTS Leucine-rich repeat signature 198 211 - -
Trre7g00793 875 PRINTS Leucine-rich repeat signature 291 304 - -
Trre7g00793 875 Gene3D Phosphorylase Kinase; domain 1 580 667 - -
Trre7g00793 875 Gene3D Ribonuclease Inhibitor 25 118 IPR032675 -
Trre7g00793 875 Gene3D Ribonuclease Inhibitor 120 484 IPR032675 -
Trre7g00793 875 Pfam Leucine Rich Repeat 198 219 IPR001611 GO:0005515
Trre7g00793 875 Pfam Leucine Rich Repeat 222 243 IPR001611 GO:0005515
Trre7g00793 875 SMART LRR_sd22_2 291 323 - -
Trre7g00793 875 SMART LRR_sd22_2 339 362 - -
Trre7g00793 875 SMART LRR_sd22_2 411 437 - -
Trre7g00793 875 SMART LRR_sd22_2 195 218 - -
Trre7g00793 875 SUPERFAMILY Protein kinase-like (PK-like) 591 862 IPR011009 -
Trre7g00793 875 ProSiteProfiles Protein kinase domain profile. 591 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00793 875 Gene3D Transferase(Phosphotransferase) domain 1 668 874 - -
Trre7g00793 875 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 668 869 - -
Trre7g00793 875 Pfam Protein kinase domain 593 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00793 875 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
Trre7g00793 875 Pfam Leucine rich repeat 293 352 IPR001611 GO:0005515
Trre7g00793 875 SUPERFAMILY L domain-like 222 474 - -
Trre7g00793 875 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00793 Trre-Chr7 5247782 5251002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00793 23 874 Receptor kinase-like Gene Family AT3G56370 49.049 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Trre7g00793 Pkinase 7.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00793 - - gmx:100813535 1006.13