Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00782 ATGAAAGAATGTACAAACAATTTCAATCTAAGCAATCTCATTGGGTTGACACAATTTGGAAGATTGTTTAGAGGAAACTTTCAAGGTCAACATGTATTAGTGAAGATATTAGATGATGAAAAATTGAAGCACATAAGTTCCAAATATAATGATGAGTATTTCATTATCAAAGAGGAAGTAAAGTTTTGGACAAATCCGATTTTGAAAGATTGTCCTAACTTGACTACTTTGATTGGTTATACTTGTGAGAGAGATATAAAAGGGGTTGTGTATGATATTAATCCCCTTGATACTTTGGACAATGTAATCAAGAAAGATGGAATGAATTGGGTTCAGAGAGTGAATGTAATTCATGAGGTTGCTAAGCTCTTGAAGTTCATTCATGACCAAGAGAAACACAACATGGTGTTGAATATTAGTGCATCTCATATACTTCTTGACAAGGATTTAAAACCAAAATTATTCGACATGTTGTTGCTTAGTGAAGTGAAAATGCTAAAGGAACAATCAACAATGTCAACTAGCTACATTGATCCTTATTTTTCTTTAAGGGGTGGTGAATGGGATAGAAGCTGTGAAGTGTATTCATTTGGCATAATCTTGCTTGAACTAATAGCAAAGAGAATTTCAAGCATTGGGAGCAGAGAACAAAATACAAACTTACATATGGATAGTCTAATACATATTTGGGCTAAGAAAGAGTTCAAGCCAAATTGTTCTCTTGTTCATAAACATCTACAAGAAGATTGGCTTTATTGTTCTGAAGATGGTGTTGCAATAACTCTATTGGCTTTGCAGTGCATAGAATATTTTCCAGCAAATCGTCCTTCAATGAGGGATGTGTTGCAAAATCTAGAAAACCTTTCAGTGTTACAACATTTGTCTGATGCTAGATCAACTAAAAGGGAAAAGAAATTCTTTTCATCTTGA 930 0.3344 MKECTNNFNLSNLIGLTQFGRLFRGNFQGQHVLVKILDDEKLKHISSKYNDEYFIIKEEVKFWTNPILKDCPNLTTLIGYTCERDIKGVVYDINPLDTLDNVIKKDGMNWVQRVNVIHEVAKLLKFIHDQEKHNMVLNISASHILLDKDLKPKLFDMLLLSEVKMLKEQSTMSTSYIDPYFSLRGGEWDRSCEVYSFGIILLELIAKRISSIGSREQNTNLHMDSLIHIWAKKEFKPNCSLVHKHLQEDWLYCSEDGVAITLLALQCIEYFPANRPSMRDVLQNLENLSVLQHLSDARSTKREKKFFSS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00782 309 SMART serkin_6 8 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00782 309 Gene3D Transferase(Phosphotransferase) domain 1 96 307 - -
Trre7g00782 309 PANTHER OS01G0588500 PROTEIN-RELATED 1 288 - -
Trre7g00782 309 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Trre7g00782 309 Pfam Protein kinase domain 11 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00782 309 SUPERFAMILY Protein kinase-like (PK-like) 4 286 IPR011009 -
Trre7g00782 309 ProSiteProfiles Protein kinase domain profile. 8 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00782 Trre-Chr7 5141508 5143962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00782 1 294 Receptor kinase-like Gene Family AT4G23320 26.059 1.62e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g00782 Pkinase 7.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00782 - - gmx:102662076 465.307