Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00781 ATGGACCCAACAAACCTTGTTGTTCTTTCATCTCAGAACATGAAAGAATGTACAAACAATTTCAATCTAAGCAATCTCATTGGGTTGACACAATTTGGAAGATTGTTTAGAGGAAACTTTCAAGGTCAACATGTATTAGTGAAGATATTAGATGATGAAAAATTGAAGCACATAAGTTCCAAATATAATGATGAGTATTTCATTATCAAAGAGGAAGTAAAGTTTTGGACAAATCCGATTTTGAAAGATTGTCCTAACTTGACTACTTTGATTGGTTATACTTGTGAGAGAGATATAAAAGGGGTTGTGTATGATATTAATCCCCTTGATACTTTGGACAATGTAATCAAGAAAGATGGAATGAATTGGGTTCAGAGAGTGAATGTAATTCATGAGGTTGCTAAGCTCTTGAAGTTCATTCATGACCAAGAGAAACACAACATGGTGTTGAATATTAGTGCATCTCATATACTTCTTGACAAGGATTTAAAACCAAAATTATTCGACATGTTGTTGCTTAGTGAAGTGAAAATGCTAAAGGAACAATCAACAATGTCAACTAGCTACATTGATCCTTATTTTTCTTTAAGGGGTGGTGAATGGGATAGAAGCTGTGAAGTGTATTCATTTGGCATAATCTTGCTTGAACTAATAGCAAAGAGAATTTCAAGCATTGGGAGCAGAGAACAAAATACAAACTTACATATGGATAGTCTAATACATATTTGGGCTAAGAAAGAGTTCAAGCCAAATTGTTCTCTTGTTCATAAACATCTACAAGAAGATTGGCTTTATTGTTCTGAAGATGGTGTTGCAATAACTCTATTGGCTTTGCAGTGCATAGAATATTTTCCAGCAAATCGTCCTTCAATGAGGGATGTGTTGCAAAATCTAGAAAACCTTTCAGTGTTACAACATTTGTCTGATGCTAGATCAACTAAAAGGGAAAAGAAATTCTTTTCATCTTGA 969 0.3375 MDPTNLVVLSSQNMKECTNNFNLSNLIGLTQFGRLFRGNFQGQHVLVKILDDEKLKHISSKYNDEYFIIKEEVKFWTNPILKDCPNLTTLIGYTCERDIKGVVYDINPLDTLDNVIKKDGMNWVQRVNVIHEVAKLLKFIHDQEKHNMVLNISASHILLDKDLKPKLFDMLLLSEVKMLKEQSTMSTSYIDPYFSLRGGEWDRSCEVYSFGIILLELIAKRISSIGSREQNTNLHMDSLIHIWAKKEFKPNCSLVHKHLQEDWLYCSEDGVAITLLALQCIEYFPANRPSMRDVLQNLENLSVLQHLSDARSTKREKKFFSS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00781 322 Gene3D Transferase(Phosphotransferase) domain 1 109 320 - -
Trre7g00781 322 SMART serkin_6 21 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00781 322 PANTHER OS01G0588500 PROTEIN-RELATED 5 301 - -
Trre7g00781 322 Pfam Protein kinase domain 24 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00781 322 Gene3D Phosphorylase Kinase; domain 1 2 105 - -
Trre7g00781 322 ProSiteProfiles Protein kinase domain profile. 21 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00781 322 SUPERFAMILY Protein kinase-like (PK-like) 6 299 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00781 Trre-Chr7 5141508 5144001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00781 14 307 Receptor kinase-like Gene Family AT4G23320 26.059 1.80e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g00781 Pkinase 8.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00781 - - gmx:102662076 481.485