Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00754 ATGAAATTCAAGCTAGGCAAGAGGGTAATTCGGGTCACTCGATGGATTTTCCGAAGATTCCGGACCCGACCCAAATATTGTCGTCTCAACGCCTCACCGGAGAAGAGTCACCTGACGACGAAGCTTCTAACATGGGGTCGGAAGTTAACTACAAAAGCGAAGTCTCTATGTTCGAAAAAAGGATCAATTGGGTCGGGTCGGTTGGGTTATGCACCGGTTGGAACTGACCCGGTTCGAGAAAACGGTTCACCGGTTCCGAAAGGTCATTTAGCGGTTTATGTGGGTCAAAAAGACGGTGAGTTTCGTCGGGTTTTGGTGCCGGTGGTTTATTTCAACCACCCTTTATTCAGTGAATTGTTGAAAGAAGCTGAGAAGGAATATGGTTTTTGTCATCAAGGTGGAATCACGATTCCTTGTCGGGTTACGGAGTTTGAACAGGTTAAAACCCGAATTGCTTCTGGGTCGGGTTTAAGGAGATTGGGTCGGCGGAGGTATTTATGA 501 0.4711 MKFKLGKRVIRVTRWIFRRFRTRPKYCRLNASPEKSHLTTKLLTWGRKLTTKAKSLCSKKGSIGSGRLGYAPVGTDPVRENGSPVPKGHLAVYVGQKDGEFRRVLVPVVYFNHPLFSELLKEAEKEYGFCHQGGITIPCRVTEFEQVKTRIASGSGLRRLGRRRYL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00754 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 60 146 IPR003676 GO:0009733
Trre7g00754 166 Pfam Auxin responsive protein 67 148 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00754 Trre-Chr7 4937003 4937503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00754 85 144 Calmodulin-binding Proteins AT3G43120 55.000 1.04e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00754 K14488 - zju:125423918 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00754 7 4937003 4937503 Trre7g00754 7 4937003 4937503 ECH