Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00697 ATGGTTCGCTCTACTGGCATCACCCTCTTTACCCACCTTGCTCGTCGATCTCTCTTTCACGCCAACGATTCCGTATGTCAAGTAGTGTTCCAAAGGGGTTATAGAACATTGAATTCAGGATCATGTAATTCGTCTAGAGTTATTGGTGGTTATGCATCAAATGTTAGAGATGGTGTTAATTTGAAGAACTGGTTGCTATTGGGAGCAGCTAATTCATATTTGGGGGCAACAAGATCAATTCATGGCTCGGCATCATTGGCAAGGGACTTTTATGATATTCTTGGTGTGAGTAAGGATGCAAGCTCTTCCGAATTAAAGAAAGCTTACTATGGGCTTGCAAAAAAGCTCCATCCAGACGCAAATAAAGATGATCCTGATGCTGAAAAGAAGTTTCAAGAAGTTACAATGGCATATGAGGTTTTGAAGGATGGGGAAAAACGTCAACAATATGATCAGGTTGGACATGATGCCTATGTAAACAACCAAAGCACTGGTTTCACAGGCGAGGGTGGCTTTAATCCTTTCGAGCAGGTCTTCAATGGTCATGATTTTTTCAAGAGCTTTTTCCATCAAAATGTTGGCGGACAGGATGTCAAGACTGTCATTGAACTATCTTTTATGGAAGCTATCCAAGGGTGCACCAAAACTTTGTCATTTCAAACAGATGTGCTTTGTAATACTTGTGGTGGGAGTGGTGTTCCTCCTGGTACAAAACCCGAAACTTGTAAGCGATGTAAAGGGTCAGGAGTGATGTATGTATCAACTGGAATATTCAGAATGCAAAGTACTTGTGTTACGTGCAAGGGAACTGGAAAAATTGTATCGAGTTTTTGCCAGTCTTGCAAGGGTGCGAAAGTTGTCAAAGGAACAAAGTCAATCAAGTTGAAGACTATTCCTGGGGTAGACAACAATGACACCCTAAAGGTGTCTGGGGGTGGTGGAGCAGATCCTGATGGACATCATTCCGGTGATCTATATGTTACTATCAAGGTTAGAGAAGATCCTGTTTTTCGCAGAGAAGGATTAGATATTCACGTGGATGCTGTTTTAAGTATTACTCAGGCGATTTTGGGGGCAACCATTGAGGTCCCATCTTTTACCGGAAGTGTAATGCTTAAGGTTCACCCAGGTACCCAACCTGGTCAGAAGGTGGTTATGAAAAGGAAGGGTATAAGGAAAGGAACAAATAGTTTCAAATATGGGGACCAATATGTTCATTTTAATGTCAACATTCCAACAAACTTGACAGAAAGACAACGTCAATTGATCGAAGAGTTTGCCAAGGAAGAGCACGAGGAATCTGATAAACGGAAAACTGCTTCAGCTTCTAGTTAA 1335 0.4157 MVRSTGITLFTHLARRSLFHANDSVCQVVFQRGYRTLNSGSCNSSRVIGGYASNVRDGVNLKNWLLLGAANSYLGATRSIHGSASLARDFYDILGVSKDASSSELKKAYYGLAKKLHPDANKDDPDAEKKFQEVTMAYEVLKDGEKRQQYDQVGHDAYVNNQSTGFTGEGGFNPFEQVFNGHDFFKSFFHQNVGGQDVKTVIELSFMEAIQGCTKTLSFQTDVLCNTCGGSGVPPGTKPETCKRCKGSGVMYVSTGIFRMQSTCVTCKGTGKIVSSFCQSCKGAKVVKGTKSIKLKTIPGVDNNDTLKVSGGGGADPDGHHSGDLYVTIKVREDPVFRREGLDIHVDAVLSITQAILGATIEVPSFTGSVMLKVHPGTQPGQKVVMKRKGIRKGTNSFKYGDQYVHFNVNIPTNLTERQRQLIEEFAKEEHEESDKRKTASASS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00697 444 SMART dnaj_3 88 146 IPR001623 -
Trre7g00697 444 Pfam DnaJ central domain 225 285 IPR001305 GO:0031072|GO:0051082
Trre7g00697 444 ProSitePatterns Nt-dnaJ domain signature. 131 150 IPR018253 -
Trre7g00697 444 Gene3D - 225 285 - -
Trre7g00697 444 Pfam DnaJ domain 89 151 IPR001623 -
Trre7g00697 444 PRINTS DnaJ domain signature 109 124 IPR001623 -
Trre7g00697 444 PRINTS DnaJ domain signature 91 109 IPR001623 -
Trre7g00697 444 PRINTS DnaJ domain signature 126 146 IPR001623 -
Trre7g00697 444 PRINTS DnaJ domain signature 146 165 IPR001623 -
Trre7g00697 444 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 47 434 - -
Trre7g00697 444 FunFam Chaperone protein dnaJ 1, mitochondrial 332 440 - -
Trre7g00697 444 CDD DnaJ_zf 225 285 IPR001305 GO:0031072|GO:0051082
Trre7g00697 444 ProSiteProfiles dnaJ domain profile. 89 154 IPR001623 -
Trre7g00697 444 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 212 288 IPR036410 -
Trre7g00697 444 SUPERFAMILY HSP40/DnaJ peptide-binding domain 336 423 IPR008971 GO:0006457|GO:0051082
Trre7g00697 444 SUPERFAMILY HSP40/DnaJ peptide-binding domain 291 341 IPR008971 GO:0006457|GO:0051082
Trre7g00697 444 CDD DnaJ 89 143 IPR001623 -
Trre7g00697 444 Pfam DnaJ C terminal domain 199 412 IPR002939 -
Trre7g00697 444 FunFam Chaperone protein dnaJ GFA2, mitochondrial 86 197 - -
Trre7g00697 444 CDD DnaJ_C 196 415 - -
Trre7g00697 444 Gene3D - 332 442 - -
Trre7g00697 444 Gene3D - 199 327 - -
Trre7g00697 444 SUPERFAMILY Chaperone J-domain 88 193 IPR036869 -
Trre7g00697 444 Hamap Chaperone protein DnaJ [dnaJ]. 86 439 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Trre7g00697 444 ProSiteProfiles Zinc finger CR-type profile. 212 290 IPR001305 GO:0031072|GO:0051082
Trre7g00697 444 Gene3D DnaJ domain 86 198 IPR036869 -
Trre7g00697 444 FunFam Molecular chaperone DnaJ 217 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00697 Trre-Chr7 4525281 4533199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00697 83 151 C2H2 Transcription Factor Family AT1G74250 40.541 5.80e-08 53.1