Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00693 ATGGGTTTGCCTGAGAGAAAGTTGTACGATGTGTTCTTGAGCTTCAGAGGGGTAGACAGTCGCGCGGCATTCATTTCACATCTTGATTCATCTCTTCAAAATGCTGGGATTTATGTTTTCCTTGATAACAATGGAATTCAACGAGGAGAAAATATCTCAGCCTCATTGTTTCAAGCAATCAGTCAGTCTAGTATTTGTATTGTTGTTTTGTCTACAAATTATGCTAATTCAAAATGGTGTATGATGGAGTTGGAGAGAATTGTGGAAATCGGAAGTACCAATGAAATGGTGGTTGTACCAGTGTTCTATAAGATAGATCCCTCAGATGTACGCAATCAGACAGGAGAGTTTGGAAAAGCTTTTGATTCTCTTATATCAACAGAAGAAGTGGATGAAAACACAAAGATGAATTGGAAAACAGTACTCCATGAAGTTGGTGGCAGAGCTGGGGTTGTCATACTGAATTCCAAGGATGAAAGTGAAGATATCAAGACAATAGTTGAACGTGTTACTCGTTTGCTAAACAAGACAGAATTGCTTGTTGCTGAGCACCCGGTGGGATTAGAATCACGTGTACAAGACGTTATTCAACTATTGAACATCCAAAAATCAAAAGATACTCTACTACTAGGGATATTGGGCATGGGAGGGATCGGGAAAACAACCCTTGCTAAAGCTGTTTACAATAAACTTCGTGATGATTTTGACAGAAAGAGCTTCCTGTTCAATGTCAGGGAAGTTTGGAAACTAGATAATGATAAAGTTTCTTTACAGCAACGACTTCTTTCTGACATCTACAAAACTACAAAGATAAAGATAGACACAGTTGAATCTGGAAAAAAGATATTACCGGAAAGACTTCGTCATTTAAAGATATTTGTTGTAATTGATGATGTGAATGACTTGGATCAATTGAATGCTCTGTGTGGAAATCGAAAATGGTTTGGTGAGGGAAGTAGAATAATCATCACCACAAGAAATGAGGATTTACTTAGAGCAGTTGAAGTTAACCATGTATACAAAATGAAGGAAATGGATGCAAGTGAATCTCTCAAGCTTTTTAATTGGCACGCATTCAAACAACCAATTCCAGGTGATGGTTTTACTAGCCTTTCTAAAGATGTTGTTAACTACTGTGGAGGACTACCGCTAGCTCTTCAAGTCATTGGGTCCTTTTTGTTCACTAAGAGCGAAGCAGAGTGGAATGATGTACTGGAGAAACTAAACCTTATTCCTGATAAGAAAGTATCAGAAGTGCTCAAAATTAGTTTTGATGGTTTACCTGATGACGATGTGAAAGATATATTCCTTGATATTGCTTTTTTCTTTATCGGTATGGACCAAGAAGACGTAGCTAAGATATTTAAAGAGTGTGGCTATTTTGCAGTAACTGGAATAAGTACTCTCGTACGACAAAGCCTTATAACCATTGATAGGAAAAACAAGATTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAGATTGTCCGTATGAAATCTAAAGAGGGGAACATGGAGCCTAGTAGAATATGGCGCTATGAGGATGTGCTTGAGTTGTCAAAAGATACTATTTCTCTTGATGTTAAGGGACTGACTTTAAAGATGCCAAGACTGGAGCCAACTTGTTTAGAAACCAACGCATTTGAGAAGATGGACAGGCTTAAATTGCTTCAATTTGCTGGCATACAACTTGATGGAGATTACAAAGTTCTTTCAAAAGAACTTAGGTGGCTTTGTTGGCATGGATTCCCTTTAGAATTTATACCCGAAGAGTTTCATCAAGGATGTTTAGTTGCTCTTGAGTTAAAATATTCTAATCTAAAACAAGTATGGGGGAAGGCTCAGTTGCTGGTGAAGCTGAAAATTCTTAATCTTAGTCATTCTCACAACTTGAGACATACTCCAGACTTTTCATACTTGCCAAATCTTGAAAAGTTAATACTTAAAGAATGTCCAAATCTGTCTTCGGTTTCTTCTACTATAGGGAAGCTTAAAAAAATTCTGTTAATAAATTTTAAGAATTGTACAGGCCTTCGTGAACTTCCAAGGAGCATCTATAAGTTAGACTCGCTCAAAACTCTCATTTTGTCTGGATGCACAAAAATTGACAAGTTGGAAGAGGATATAGAACAAATGAAATCTTTAACCACCTTGGTTGCGGATAACACTGCTATCAAAAGTGTTCCCTTTGCATTAGCAAGATCAAAAAGCATTGCTTATATTTCTCTCTGTGGCTACGAAGGATTCGCAAGTCAAGTGTTTCCTTCTATTATTCAGTCTTGGTTGTCTCCAACAAATAATGTTCTACCTCTAGTTCAAATATCTGCAGGAACTCCATGTCTTGATTTCACTGATGAACAAAATAAGAGTTTCTATTGTCTACCGTCCACTTTTGAAGACCTTCAGGATCTTCAACGTCTTTGGTTGGAATGCGATTCAGAAGCTCAACTAAATCAAACTGTGGCAAGTATTTTGTATAGCTTTAACACTCAAAATTGTGAGGGATTCTCTAATATTGGGACTACAGCATCAATTCATTGCAGCAGTCAAGTTGGTATTTCAAGCTCAAAAAATTCCTTGACATCCCTTTTGATTCAAATGGGAATGAGCTGCAATGTCACTTCCATTCTCACAAATATTTTGCAGAAAATTCCTCCCGCCGGGTCTGGTTTACTACCCTGTGACAACTCTCCCAATTGGCTAACCTTCACTAGCAACGATTCTTCTGTAACTTTTGAAGTACCTCAAGTAGATGGGCGTAATTTGAAGACAATCATGTGCATTGTCTATTCTTCTTCTTCAGACAATGCAACAACAGAAGGTGTTAAAGTTGTGTTGGTAATAAATTACACAAAGAACACCATTCAGATCTACAAGAGAGATGGATTACTAGCCATCTCTGATGAGGAGGAGTGGCAGAGGGTAATAGCAAATATAGAACCTGGAAATAAAATTAAGTTCATTGTTGGTTTTACAAATGAGTTCATTGTGAAGAAGACAACAATTTATCTTGTATATGATGAACCAAATGAGGAAAAGAAGAATGACTGCCATGAGACAGATGAGAATGGCGTTATTTTTTGTGGTGATGAAAATCGTGTACTTGAACAAATAGTTGAAGAAACCCATCTTTCATCTCAAACAACTGTACCTGTGGGTCAGCATATCAGCCAAATCCAACTTTTGCAAACTTTTGACCTCCCCAAAGTAGTCACATCTTTCGATAGCTTGGTTTCTGGGTCTGTTAAGTCTCAAACCAGGCCTTGTACATCTGATCCTTCTATACCAAAGGAAACTTCTTCAATCTTATCTCACACTGGCCAACCACAAGAAAAGGAAGGAGAGAATCAATCTGACAGTAGATGTTATTCAACTCCTCATCTGGAAAATGTTGTAGACAACCAAGATAGTACTGACAGTGAATCATCTCATGCTTCTTCTCCTCCTAAGGAAACTATGAATGAAACAAAATTTCCTAATGTGATACAAGCTGATCATGAAGTCCCTCCTACTGGTGTTCAAATCTCGAATTTTGTGATTCCTCCCAATATTCCTATTGATGACGAGCTTCAAACTAGATTAGCTGCTTTCAACATTGACATGGAAAACAATGTTACTGCTGCGATAGAGAGATTCATATCAACACTTGGTTTATCGAGTGACCCAATAGTTTCAACTTCACAAAGTGGTGCCTCATCTCAACTAACCACTACTGCTGACTCTCTGGTTCAAGAACTTCGTAGTTTAGCTTTTGATGGACCTCCATTTGATAGCCTTTCTTCGATAAGGGCTTTGAATCAGTCTCTTGACTCATTCAAGCAAAAACTTAGAGTTCATCAACACCTTCTTCTTGCTTCACAACTTGAAGGCTTTACCACAGTCTTGACTAATCTTGAAGATATTGTAAAGACTTACCGTGGTTATGAGCAAGAGAGGACACGCAAAGAACATTCTGAATTTGAAGTTGCAAAGTTCGCGATTGCTATGAATGAATCCAAAATCAAGTTTAATAAGTATCAAAATCTTATAAGTGACTGTGAGAATCGTGACAAAGAGATTATTACAAAAGTTGAGGCATTGAAGAGAGAAATCCAAGGCTTGGAGATGGAGCAGGGAAATTTGAATGTTCAAAAAGAATTTGCTATAGAAGAGATGAATTCTGAAAAGAGAGTCTTACATTCACAAGCGGCCAGTCTAATTGCCCATCAATCTCTACTTCGAGCCTCACAAGACAAGCTTTCTACTCTAGATGAAAACCTTCAGCAATGTAAAACTACTTATGCTGAACTTAAGCAGCATCCTCCGATTTAG 4314 0.3776 MGLPERKLYDVFLSFRGVDSRAAFISHLDSSLQNAGIYVFLDNNGIQRGENISASLFQAISQSSICIVVLSTNYANSKWCMMELERIVEIGSTNEMVVVPVFYKIDPSDVRNQTGEFGKAFDSLISTEEVDENTKMNWKTVLHEVGGRAGVVILNSKDESEDIKTIVERVTRLLNKTELLVAEHPVGLESRVQDVIQLLNIQKSKDTLLLGILGMGGIGKTTLAKAVYNKLRDDFDRKSFLFNVREVWKLDNDKVSLQQRLLSDIYKTTKIKIDTVESGKKILPERLRHLKIFVVIDDVNDLDQLNALCGNRKWFGEGSRIIITTRNEDLLRAVEVNHVYKMKEMDASESLKLFNWHAFKQPIPGDGFTSLSKDVVNYCGGLPLALQVIGSFLFTKSEAEWNDVLEKLNLIPDKKVSEVLKISFDGLPDDDVKDIFLDIAFFFIGMDQEDVAKIFKECGYFAVTGISTLVRQSLITIDRKNKIGMHDLLRDMGREIVRMKSKEGNMEPSRIWRYEDVLELSKDTISLDVKGLTLKMPRLEPTCLETNAFEKMDRLKLLQFAGIQLDGDYKVLSKELRWLCWHGFPLEFIPEEFHQGCLVALELKYSNLKQVWGKAQLLVKLKILNLSHSHNLRHTPDFSYLPNLEKLILKECPNLSSVSSTIGKLKKILLINFKNCTGLRELPRSIYKLDSLKTLILSGCTKIDKLEEDIEQMKSLTTLVADNTAIKSVPFALARSKSIAYISLCGYEGFASQVFPSIIQSWLSPTNNVLPLVQISAGTPCLDFTDEQNKSFYCLPSTFEDLQDLQRLWLECDSEAQLNQTVASILYSFNTQNCEGFSNIGTTASIHCSSQVGISSSKNSLTSLLIQMGMSCNVTSILTNILQKIPPAGSGLLPCDNSPNWLTFTSNDSSVTFEVPQVDGRNLKTIMCIVYSSSSDNATTEGVKVVLVINYTKNTIQIYKRDGLLAISDEEEWQRVIANIEPGNKIKFIVGFTNEFIVKKTTIYLVYDEPNEEKKNDCHETDENGVIFCGDENRVLEQIVEETHLSSQTTVPVGQHISQIQLLQTFDLPKVVTSFDSLVSGSVKSQTRPCTSDPSIPKETSSILSHTGQPQEKEGENQSDSRCYSTPHLENVVDNQDSTDSESSHASSPPKETMNETKFPNVIQADHEVPPTGVQISNFVIPPNIPIDDELQTRLAAFNIDMENNVTAAIERFISTLGLSSDPIVSTSQSGASSQLTTTADSLVQELRSLAFDGPPFDSLSSIRALNQSLDSFKQKLRVHQHLLLASQLEGFTTVLTNLEDIVKTYRGYEQERTRKEHSEFEVAKFAIAMNESKIKFNKYQNLISDCENRDKEIITKVEALKREIQGLEMEQGNLNVQKEFAIEEMNSEKRVLHSQAASLIAHQSLLRASQDKLSTLDENLQQCKTTYAELKQHPPI 1437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00693 1437 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 149 IPR035897 -
Trre7g00693 1437 Gene3D - 4 179 IPR035897 -
Trre7g00693 1437 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 176 - -
Trre7g00693 1437 Pfam TIR domain 9 176 IPR000157 GO:0007165
Trre7g00693 1437 Coils Coil 1351 1378 - -
Trre7g00693 1437 SUPERFAMILY "Winged helix" DNA-binding domain 415 520 IPR036390 -
Trre7g00693 1437 ProSiteProfiles TIR domain profile. 7 174 IPR000157 GO:0007165
Trre7g00693 1437 SUPERFAMILY L domain-like 533 867 - -
Trre7g00693 1437 MobiDBLite consensus disorder prediction 1083 1155 - -
Trre7g00693 1437 SMART till_3 8 148 IPR000157 GO:0007165
Trre7g00693 1437 Gene3D - 345 428 IPR042197 -
Trre7g00693 1437 Coils Coil 1414 1434 - -
Trre7g00693 1437 Gene3D Ribonuclease Inhibitor 530 892 IPR032675 -
Trre7g00693 1437 Gene3D - 180 342 IPR027417 -
Trre7g00693 1437 PRINTS Disease resistance protein signature 286 300 - -
Trre7g00693 1437 PRINTS Disease resistance protein signature 687 703 - -
Trre7g00693 1437 PRINTS Disease resistance protein signature 379 393 - -
Trre7g00693 1437 PRINTS Disease resistance protein signature 209 224 - -
Trre7g00693 1437 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 827 IPR044974 GO:0006952
Trre7g00693 1437 MobiDBLite consensus disorder prediction 1120 1155 - -
Trre7g00693 1437 MobiDBLite consensus disorder prediction 1083 1112 - -
Trre7g00693 1437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 439 IPR027417 -
Trre7g00693 1437 Pfam NB-ARC domain 189 409 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00693 Trre-Chr7 4495287 4502277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00693 7 733 WRKY Transcription Factor Family AT4G12020 30.831 5.49e-78 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00693 - - mtr:11408937 1370.14