Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00686 ATGTCTTCTTTCATAAGCTCTTCTTCAAGAAGCCACAAATCTGATGTGTTTTTGAGTTACCATGACAAAGAAGCCTGTAAATCATTTGCATCGGATCTCTATTCAGCTCTAACACGGGCTGGACTTGTTGTTTACATCAACCATAACAATCTTACAAGCGGAGATCAGACAAATTTCTCAGCAATCAAAGCTTCTAGATCTTCTATCATCAGTAATTTTGACGCTTCTAGATGGTTTCTAGAAGAACTGGAGCAGATATTGGACTGTGGTAGATCCATAGGGCAGGTGGTTCTGCCTGTGTTCTATGCTGTAGATCCCTCGGATGTACGTCGTCAGATTGGAATTTTTGGAAAAGCTTTTGAAGATCTTATTGCACAAAGGATCTTGACAAACAATGAGTTAACGCGTTATAAGGAAGCGCTCATTGAAGCTTCCAGCATTGATGGATTTCTCGTGATGAGTTCCAGCAGATTATGGTCTCATAAAGATGTTTTTGATGTACTAAAAGGAAACATGGGAAGTTCTACAGTTGAAGGAATAAAGCTTCATCCCCCAAAACAAGAAAAAGTAGATCAAATTGTTGACTTCAAGTTACCTCATTGCTCTATGATATTGAAAAAGCCCTTCCAGATTTTTGAGGATTTAACATTCATCAATCTCTCACATAGTCAATCCATAACTCAAATTCCTGATCTGTCTGGTGCTAAAAACTTAAGAAGGTTTACACTTGATAAATGTCGTAAACTGGTAAGGTTTGATATATCTATTGGATTTCTGCCTAATCTGGTGTATTTAAGTGCCTCTGGGTGCACTGAGCTCAAATGTTTTGTGCCAAAAATGTTTTTGCCATCCCTTCAAGAGATTTCATTTAATTTCTGCGAAAAGTTGGAATACTTCCCACATGTAATGCAAAAGATGGATAAGCTATTAAAGATTCACATGATAAATACGGCTGTTAAGGAGTTTCCAAAGTCTATTGGTAACCTTACGGGGCTTCAATATATAGACATGTCACATTGCAGAAGAGTCAAAGATCTATCAAGTAGCTTCTTACTACTTCCAAAACTGCTCACTTTGAAAATTGATGGATGCCCTCAACTTGGGGAAGCATTTCAAAGGTTCAAAGATCACCATTCAAGGGAAAACGGTTATCCAAATTTAGAAACACTTCATTTTAGCGAGGCTAATCTGTCATATGAAGATGTTGATGCCATTATTGAATGTTTTCCAAAACTCACAGACTTGAAAGTATCACACAGTGAGTTTATAGCACTTCCAGAATGCATCAGAGGTTCTTTGCACTTGAAAAATCTTGATGTGAGCTTTTGCAATAATCTAGCAGAAATTCCAGAACTTCCATTAAGTATTCAGAAAATAGATGCAAGACATTGTCCATCCTTAACATCAGAGGCATCCAGTTTGCTCTGGTCAAAGGTTTCTCAAGAAATCCAAAGAATACAAGTTGTGATGCCGATGCTGAAAAGAGAGTTTCCAGAATGGTTTGACTGTATTTACTCTGAAGGAATTCCGATTTTTTGGGCTCGCAGGAAGTTTCCCATTGTTGCTTTAGCATTAGTTTTCCAGGAAGTAAAAAAAACGACAGACGATGTTCCTACATTTAGTGATAAAATAAGATTGTTGTATGGAATCAAGAGATGGTACACTGTTAGCCTCCATTTGTTTATTGATGGCCAAGAAATTTGTGGCAGGGATTTCCAGTTTTTCAATGTTGGGGAAGATCATGTGCTATTGTGTGATCTACGAGTTTTGTTTAGTGATGAAGAGTGGCAGAACCTTGATGCAAGTCTTGGAGATGACTGGTCGACCATTCAGGTTCAATGTGTTCCAAACTTGAAGCAAGACTTGATTCTGACTAATTGGGGAGTTTATGTGTACAAGCAAGAAACAAGCATGAATAATATACGATTCATACCTCCGAATCTGATCAAACCGTTTTCCAATATGCTATCATCATGTTTGGTTCCACAAAGATCTTTTGAGAAGACAGAGCAGTACATGAAACATATTCTCAACAGTTTCAAATTGACAGACTTGTTGAATGCGGATTCCATTTGCCAACAATCAGTTTCAGACATTTCTTTAAAAGTGCTTCTCCGGTCTTTGAGAAATGCCAAGGCTGAAATTACAGGTGAGGCTTCCTCCTCTCTATGTGGGGCAAGTTTAAAACAAGACCGTGAAGATTCTGTAGCGGACGTGGTTCAGGTATTAGAGATGCTGAAAGAGAATGCACCAAAACATTTTGCTGAACATGAATATTATCAAATTGAAGAAGAGGCTGTGGAAAACTTATTGACGGCACATGTAGAATTGGAAAACACCTTGAACATCAGAATGCCTATTGTTCTAGTTTTCAATATACTGGAAATAAAGTACCAACGCTATTGGGGAGATATTGAAATAAAGTTGGGAGATCCAGTTTTCAAATCAGTGTTGAGTAGGTTTAACGATTTTCCGTTTCGAGTTGGGACAACCACTGAAACCTCAGCCACTGTCCTTGAATTGAAATGCCAGCCTCTATTTGAGGAGGAAGCTTCGAGCTCTAGCATTGAAGAATCCTTGGAGGAAGGATACCATGATCCTGTATTTGAAGAGTTTATGAGGAGGATAGAGCAAGATGCTATGAGCTTGAATAAACATTATGGCAAAATGAAGGCATCTATTGTTCAAATTGATGGGCCATTTTCTGAATTTTATGAAGGAGAAGCTTTCTTGTTCAAAACAATTACGAGAAATCGTTTTATGAGATTGATGATGTTTGGATCACCATTCAAGATTAAGATCACACCTTATGGGATGATTAGGTCAGAGGACGAATCTTTATTCACGGTCAGGACATGTTTCTGGTTATTGTACTTGGCTCTTCTTGCTCTAATCTTACTGTCATATGGTTTTACTCATACGATATTATTATGGGGTTGGTTGCTTGTCAAGAAAATTTTCGTTGTGTCTTGTAAAAAAGTATACTGGATAATTAACAAGAGTATTATGAGAGTAAAGAAGAAGGAATTGTAG 3033 0.3772 MSSFISSSSRSHKSDVFLSYHDKEACKSFASDLYSALTRAGLVVYINHNNLTSGDQTNFSAIKASRSSIISNFDASRWFLEELEQILDCGRSIGQVVLPVFYAVDPSDVRRQIGIFGKAFEDLIAQRILTNNELTRYKEALIEASSIDGFLVMSSSRLWSHKDVFDVLKGNMGSSTVEGIKLHPPKQEKVDQIVDFKLPHCSMILKKPFQIFEDLTFINLSHSQSITQIPDLSGAKNLRRFTLDKCRKLVRFDISIGFLPNLVYLSASGCTELKCFVPKMFLPSLQEISFNFCEKLEYFPHVMQKMDKLLKIHMINTAVKEFPKSIGNLTGLQYIDMSHCRRVKDLSSSFLLLPKLLTLKIDGCPQLGEAFQRFKDHHSRENGYPNLETLHFSEANLSYEDVDAIIECFPKLTDLKVSHSEFIALPECIRGSLHLKNLDVSFCNNLAEIPELPLSIQKIDARHCPSLTSEASSLLWSKVSQEIQRIQVVMPMLKREFPEWFDCIYSEGIPIFWARRKFPIVALALVFQEVKKTTDDVPTFSDKIRLLYGIKRWYTVSLHLFIDGQEICGRDFQFFNVGEDHVLLCDLRVLFSDEEWQNLDASLGDDWSTIQVQCVPNLKQDLILTNWGVYVYKQETSMNNIRFIPPNLIKPFSNMLSSCLVPQRSFEKTEQYMKHILNSFKLTDLLNADSICQQSVSDISLKVLLRSLRNAKAEITGEASSSLCGASLKQDREDSVADVVQVLEMLKENAPKHFAEHEYYQIEEEAVENLLTAHVELENTLNIRMPIVLVFNILEIKYQRYWGDIEIKLGDPVFKSVLSRFNDFPFRVGTTTETSATVLELKCQPLFEEEASSSSIEESLEEGYHDPVFEEFMRRIEQDAMSLNKHYGKMKASIVQIDGPFSEFYEGEAFLFKTITRNRFMRLMMFGSPFKIKITPYGMIRSEDESLFTVRTCFWLLYLALLALILLSYGFTHTILLWGWLLVKKIFVVSCKKVYWIINKSIMRVKKKEL 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00686 1010 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 123 IPR035897 -
Trre7g00686 1010 SUPERFAMILY L domain-like 189 480 - -
Trre7g00686 1010 Gene3D Ribonuclease Inhibitor 305 486 IPR032675 -
Trre7g00686 1010 Gene3D Ribonuclease Inhibitor 192 304 IPR032675 -
Trre7g00686 1010 Gene3D - 7 171 IPR035897 -
Trre7g00686 1010 SMART till_3 13 147 IPR000157 GO:0007165
Trre7g00686 1010 Pfam TIR domain 15 150 IPR000157 GO:0007165
Trre7g00686 1010 Coils Coil 760 780 - -
Trre7g00686 1010 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 151 IPR044974 GO:0006952
Trre7g00686 1010 ProSiteProfiles TIR domain profile. 12 168 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00686 Trre-Chr7 4439193 4444041 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00686 185 380 WRKY Transcription Factor Family AT4G12020 32.683 3.19e-17 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00686 - - vum:124827448 871.692