Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00684 ATGGGAAGTTCTACAGTTGAAGGAATAAAGCTTCATCCCCCAAAACAAGAAAAAGTAGATCAAATTGTTGACTTCAAGTTACCTCATTGCTCTATGATATTGAAAAAGCCCTTCCAGATTTTTGAGGATTTAACATTCATCAATCTCTCACATAGTCAATCCATAACTCAAATTCCTGATCTGTCTGGTGCTAAAAACTTAAGAAGGTTTACACTTGATAAATGTCGTAAACTGGTAAGGTTTGATATATCTATTGGATTTCTGCCTAATCTGGTGTATTTAAGTGCCTCTGGGTGCACTGAGCTCAAATGTTTTGTGCCAAAAATGTTTTTGCCATCCCTTCAAGAGATTTCATTTAATTTCTGCGAAAAGTTGGAATACTTCCCACATGTAATGCAAAAGATGGATAAGCTATTAAAGATTCACATGATAAATACGGCCGTTAAGGAGTTTCCAAAGTCTATTGGTAACCATACGGGGCTTCAATATATAGACATGTCACATTGCAGAAGAGTCAAAGATCTATCAAGTAGCTTCTTACTACTTCCAAAACTGCTCACTTTGAAAATTGATGGATGCCCTCAACTTGGGGAATCATTTCAAAGGTTCAAAGATCACCATTCAGGGGAAAACGGTTATCCAAATTTAGAAACACTTCATTTTAGCGAGGCTAATCTGTCATATGAAGATGTTGATGCCATTATTGAATGTTTTCCAAAACTCACAGACTTGAAAGTATCACACAGTGAGTTTATAGCACTTCCAGAATGCATCAGAGGTTCTTTGCACTTGAAAAATCTTGATGTGAGCTTTTGCAATAATCTAGCAGAAATTCCAGAACTTCCATTAAGTATTCAGAAAATAGATGCAAGACATTGTCCATCCTTAACATCAGAGGCGTCCAGTTTGCTCTGGTCAAAGGTTTCTCAAGAAATCCAAAGAATACAAGTTGTGATGCCGATGCTGAAAAGAGAGTTTCCAGAATGGTTTGACTGTATTTACTCTGAAGGAATTCCGATTTTTTGGGCTCGCAGGAAGTTTCCCATTGTTGCTTTAGCATTAGTTTTCCAGGAAGTAAAAAAAACGACAGATGATGTTCCTACATTTAGCGATAAAATAAGATTGTTGTATGGAATCAAGAGATGGTACACTGTTAGCCTCCATTTGTTTATTGATGGCCAAGAAATTTGTGGCAGGGATTTCCAGTTTTTCAATGTTGGGGAAGATCATGTGCTATTGTGTGATCTACGAGTTTTGTTTAGTGATGAAGAGTGGCAGAACCTTGATGCAAGTCTTGGAGATGACTGGTCGACCATTCAGGTTCAATGTGTTCCAAACTTGAAGCAAGACGTGATTCTGACTAATTGGGGAGTTTATGTGTACAAGCAAGAAACAAGCATGAATGATATACGATTCATACCTCCCAATCTGATCAAATCGTTTTCCGATATGCTATCATCATGTTTGGTTCCACAAAGATCTTTTGAGAAGACAGAGCAGTACATGAAACATATTCTCAACAGTTTCAAATTGACAGACTTGTTGAATGCGGATTCCATTTGCCAACAATCAGTTTCAGACATTTCTTTAAAAGTGCTTCTCCGGTCTTTGAGAAATGCCAAGGCTGAAATTACAGGTGAGGCTTCCTCCTCTCTATGTGGGGCAAGTTTAAAACAAGACCGTGAAGATTCTGTAGCGGACGTGGTTCAGGTATTAGAGATGCTGAAAGAGAATGCACCAAAACATTTTGCTGAACATGAATATTATCAGATTGAAGAAGAGGCTGTGGAAAACTTATTGACGGCACATGTAGAATTGGAAAACACCTTGAACATCAGAATGCCTATTGTTCTAGTGTTCAATATACTGGAAATAAAGTACCAACGCTATTGGGGAGATATTGAAATAAAGTTGGGAGATCCAGTTTTCAAATCAGTGTTGAGTAGGTTTAACGATTTTCCGTTTCGAGTTGGGACAACCACTGAAACCTCAGCCACTGTCCTTGAATTGAAATGCCAGCCTCTATTTGAGGAGGAAGCTTCGAGCTCTAGCATTGAAGAATCCTTGGAGGAAGGATACCATGATCCTGTATTTGAAGAGTTTATGAGGAGGATAGAGCAAGATGCTATGAGCTTGAATAAACATTATGGCAAAATGAAGGCATCTATTGTTCAAATTGATGGGCCATTTTCTGAATTTTATGAAGGAGAAGCTTTCTTGTTCAAAACAATTATGAGAAATCGTTTTATGAGATTGATGATGTTTGGATCACCATTCAAGATTAAGATCACACCTTATGGGATGATTAGGTCAGAGGACGAATCTTTATTCACGGTCAGGACATGTTTCTGGTTATTGTACTTGGCTCTTCTTGCTCTAATCTTACTGTCATATGGTTTTACTCATACGATATTATTATGGGGTTGGTTGCTTGTCAAGAAAATTTTCGTTGTGTCTTGTAAAAAAAATGTCTATAGCTTTGTTCATAAGATTTGCATCTTTGTCTACAATAGTTGCACTAGAAGGGGATTCGTCTTGAATTGCTTTCAGGTATGA 2556 0.3764 MGSSTVEGIKLHPPKQEKVDQIVDFKLPHCSMILKKPFQIFEDLTFINLSHSQSITQIPDLSGAKNLRRFTLDKCRKLVRFDISIGFLPNLVYLSASGCTELKCFVPKMFLPSLQEISFNFCEKLEYFPHVMQKMDKLLKIHMINTAVKEFPKSIGNHTGLQYIDMSHCRRVKDLSSSFLLLPKLLTLKIDGCPQLGESFQRFKDHHSGENGYPNLETLHFSEANLSYEDVDAIIECFPKLTDLKVSHSEFIALPECIRGSLHLKNLDVSFCNNLAEIPELPLSIQKIDARHCPSLTSEASSLLWSKVSQEIQRIQVVMPMLKREFPEWFDCIYSEGIPIFWARRKFPIVALALVFQEVKKTTDDVPTFSDKIRLLYGIKRWYTVSLHLFIDGQEICGRDFQFFNVGEDHVLLCDLRVLFSDEEWQNLDASLGDDWSTIQVQCVPNLKQDVILTNWGVYVYKQETSMNDIRFIPPNLIKSFSDMLSSCLVPQRSFEKTEQYMKHILNSFKLTDLLNADSICQQSVSDISLKVLLRSLRNAKAEITGEASSSLCGASLKQDREDSVADVVQVLEMLKENAPKHFAEHEYYQIEEEAVENLLTAHVELENTLNIRMPIVLVFNILEIKYQRYWGDIEIKLGDPVFKSVLSRFNDFPFRVGTTTETSATVLELKCQPLFEEEASSSSIEESLEEGYHDPVFEEFMRRIEQDAMSLNKHYGKMKASIVQIDGPFSEFYEGEAFLFKTIMRNRFMRLMMFGSPFKIKITPYGMIRSEDESLFTVRTCFWLLYLALLALILLSYGFTHTILLWGWLLVKKIFVVSCKKNVYSFVHKICIFVYNSCTRRGFVLNCFQV 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00684 851 Gene3D Ribonuclease Inhibitor 124 317 IPR032675 -
Trre7g00684 851 SUPERFAMILY L domain-like 30 306 - -
Trre7g00684 851 PANTHER LEUCINE-RICH REPEAT-CONTAINING 40 194 - -
Trre7g00684 851 Gene3D Ribonuclease Inhibitor 26 123 IPR032675 -
Trre7g00684 851 Coils Coil 589 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00684 Trre-Chr7 4429267 4432456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00684 14 205 WRKY Transcription Factor Family AT4G12020 32.338 2.92e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00684 - - vum:124827448 860.136