Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00682 ATGGCGGATCAAAACCATTTCATACACGATGTTTTTCTCAGTTTCAGAGGCGAAACTCGCTACTCCTTCACCGATCATCTTTATCATTCACTTCTCCGTCATGGAATCAATGTTTTCAGAGACGATCGAAAACTCAAAATCGGCGACGAAATAGGTCCTTCTCTTCTACAAGCAATCGAAGATTCTAGAATCTCAATTGTTGTTCTCTGTAAAGACTACGCTTCTTCCAGTTGGTGTCTTGATGAACTTGTTAAGATCGTTGACTGTTATGAAAATAATGGAAAATCGGTTTTTGTTATATTTTATAAGGTTGAACCTTCAGATGTTAGGTACCAGAAAAATAGTTATGAAGATGCTATGAGGAAACATGTAGAGAGATTTGGAAGTGAATCGGAGAAAGTGAAAGCATGGAGATTCGCTTTGAACAGAGTTTGTGCTCTAAGTGGACTTCATTACAAAGGCGATTTCTATGAATCTGAGTTTATTGAGAAGATTGTCAAAGACATCTCAGCTAAACTACCCCCCATTCCTTTACAAGTCAAACACATAGTCGGACTCGATTATCGTTTTGAACATGTGAAATCTCTCATTGATATTGAATCTAATGATGTTTGCATGCTGGGAATTTATGGAGTTGCTGGAATAGGAAAAACCACATTTGCCATGAATATATATAACATGATCAGACATCAATTTGAAGCTGCTAGTTTTCTAGCTAATGTTAGAGAAAAATCAAATGAAAGACATACTGGCCTGGAAGATCTCCAAAAAACTCTTCTATATGAGATGGGTGAAGAAACACAAACCTTAGGAAGCACATTTAGAGGAAGCTCTGAAATAAAACTCAGGCTTGTCCACAAAAAAGTTCTTCTCATACTCGATGATGTTGATTCGGTAAAACAATTAGAATCACTAGCTGGAGGACATGATTGGTTTGGTCCTGGTAGCAGAATCATTGTAACAACAAGAGATGCTGATGTTCTACATAAGCACGATGTTGAAATCAAAACATATAAACTCGAAGAGCTAAATCATGATGAATCCATTGAACTCTTTTGTTGGTATGCCTTTAATATGAGCAGACCGGTAGATGATTTTGCAAATATATCTTCTCATGCAATAAGTTATGCAAAGGGTATTCCATTGGCTTTAAGAGTAATAGGATCCAATTTGAAAGGTAAGAGCATAGAGGAATGGGATATTGAACTGCAGAAATATAAAAAGGTTCCAGATGCTGAGATTCAAGGTGTACTAGAAATAAGCTACAAATGTCTATCTGACTTGGACCAGAAAATTTTTCTTGACATTGCTTGTTTTTTCAAAGGGGAAAGATGGGATTATGTCAAAAGGATACTAGATGCTTGTGATTTCTTCCCAATTATTCGAGTATTTGTTAATAAATGCCTCATAACTGTTGATGAAAATGGTTGCTTAGAAATGCATGATCTAATACAAGACATGGGTAGAGAGATTGTTCGCAAGGAATCGACATCAAACCCTGGTGAACGCAGCAGATTATGGTCTCATAAAGATGTTCTTAATGTATTGAAAGGAAACTTGGGAAGTACTATAGTTGAAGGAATAATGCTTGATCCCCCAAAACAAGAGAAAGTAGATCATTGGGCATATGATGCCTTTCAGAAGATGAAAAATCTCAGAATTTTGATTGTTAGGAATACATTGTTTTCTTCAGGGCCTAGTTATTTGCCGAATAGTTTACGGCTACTAGATTGGAAGTGCTATCCATCAAAGAATTTCCCGGCTAATTTTTATCCACAGAAAATTGTTGACTTCAAGTTACCTCATAGCTCTATCATATTGAAAAATCCCTTTCAGATTTTTGAGGATTTAACATTCATCAACCTCTCCCATAGTCAATCCATCACTCAGATTCCTGATCTATCTGGAGCTAATAACTTAAGAGTGTTTACAGTTGATAAATGTCGTAAACTGGTAATGTTTGATATATCCATTGGATTTATGCCTAATCTGGTGTATTTAAGTGCTTATGGATGCCCTGAGCTCAAAAGTTTTGTGCCAAAAATGTATCTTCCCTCCCTTCAAGTGCTTTCATTTAATTACTGCAAAAAGTTTGAACACTTCCCACATGTAATGCAAAAGATGGATACACCATTAAAGATTCACATGATAAATACCGCCATTAAGAAGTTTCCAAATTCTATTGGTAACCTTACAGGGCTTGAGTATATAGATATGTCAATTTGTAAAGAGCTTAAAGATTTATCAAGTAGCTTCTTATTGCTGCCAAAACTGGTCACTTTGAAAATTGATGGATGCTCTCAGCTTGGACAATCATTTCAACAGTTCAAAGAGCACCATTCAATGGCAAATGGCTATCCAAATTTAGAAACACTTCATTTTAGTGAGGCTAATCTATCATATGAAGATGTTAATGCCATTATTGAAAAGTTTCCAAATTTGGAAGACTTGAAATTATCGCACAATGGGTTTGTAGCCCTCCCAAATTGCATTAGAAGATCTATGCACTTAAAAAGTCTTGATGTGAGCTTTTGCAGGAATCTGATAGAAGTTCCAGAACTTCCATTAAGTATTCAGAAAATAGATGCAAGACATTGTCAATCCTTAACTTTAGAGGCATCAAGTGTGCTCTGGTCCAAGGTTTCACAAGAGGTCCAAAGAATACAAGTTATGATGCCAATGCCCAAATGGGAGATTCCAGAATGGTTCGACTGTGTTTGCACTCAAGAGGTTCCGCTTTTTTGGGCTCGCCGGAAGTTTCCTGTTGTTGCTTTAGCATTTGTGTTCCAGGAAGTAAAAAATACAGATGATGTTTCTAATTTTGTTGATGCTATGAGCCTGTTGACTGGAGTCAAGGGCTGGCACACTGTTAGCCTCCATTTGTTTATTGATGGTCAAGAAATCTGTAGCAAGAATTGCCATTATTTCAATGTTGGAGCAGATCATGTGCTATTGTGTGATCTACGAGTTTTATTCAGCGATGAAGAGTGGCAGGACATTGATGCAAGTCTTGGAGATGAATGGAAGGCCATTCAAGTTCAATATGATTCAGACTTGATTCTGACTAAGTGGGGAGTTTATGTGTACAAGCAAGAGACAAGCATGGATGATATCCAATTCCTACCTCCCAATCGCAACTCCTTTTCCTACACGTCATCATCATGTTTGGTTCCAAAGGGATCTCCAGAGCAAAAAATGAAACATATGCTGGAAAGTTTCAATCCAAGAGACATGTTTAATGACTGTTTGCCTTTAATCGAATCAGAGGAAGGTCCAGTCAGGTCTTTAAAAGTGCTATTGCGGTCTTTGAGGAATGCCAAGGCTGAAGTTATAGAAAAGACTTCTTCTGCCTATGGGGCTAGTCTAAAGCAAGACCATGAAGATTCTGCAGAGGATGTGATTCAAGTAGTGGAGATGATAAAAGAGAATTTTTCAGGACATTTTGTTGATTTATCTCCTGAAGATCTTCAAATTATAAGCAGAGTTTCGGAAAGACTTATGAGATCACGGGTAGAATTAATGGAGGAAAATAGCTTGGACATTGGTATGCCTATTATTCTAGAGTATATTGATGCATCGGGATCCACAAACCGACGCTTTTGGGGAATCATGGAGATAAAATTGGGAGATCCATTTTACAAACCAGTGTTGAAGAGGTACCACCAGCTTTCCTGGGCACTTAGTACGTCCGATCTGAGGGTAATCATTGTTGAATTGAAATGCCAACCTGCAGGTGAAGAGGAAGCTTCAAGCTCTAGCCTTGATGAATCCTCGGAGGATGGAAACTACAATCCTGAATTGGAAGAATTAATGAGGAGGATTGAGAAAGATGCTATGAGCTTGAATAAATCTTATGGAAAAATGAAGGCATCTATTGTTCAAACTGATAGGTCAGTTTCCGAAAATTATATATTGGAAACATTAGTCTTCAGAAGACTAATAATTTTAGGAAAATTGACAATGTTTGGATTAGCCACTGTGTTCAAGATCACACCTTATGGGAAGATAAGGCAAGATGACGATCCTTTCCGCATTCTGAGGATATGTTTTGGGTGCCTGATCTTGGTTCTTTTTGTCGTAATCATATGGTCATTTTATTTCATTGTATTTGTGTGCCTTTCTTTATATAGGATACCAATGACAATAATAAGGAAGTTATTAGAATGTGGTTGGTGGCTTGTTAAGCAAACTTTTATGTCTTGTAAAAAATTACACAGGAGAATTGGCAAGAATATTATGAGTATAAAGGGGAAGGAATCGTAG 4263 0.3718 MADQNHFIHDVFLSFRGETRYSFTDHLYHSLLRHGINVFRDDRKLKIGDEIGPSLLQAIEDSRISIVVLCKDYASSSWCLDELVKIVDCYENNGKSVFVIFYKVEPSDVRYQKNSYEDAMRKHVERFGSESEKVKAWRFALNRVCALSGLHYKGDFYESEFIEKIVKDISAKLPPIPLQVKHIVGLDYRFEHVKSLIDIESNDVCMLGIYGVAGIGKTTFAMNIYNMIRHQFEAASFLANVREKSNERHTGLEDLQKTLLYEMGEETQTLGSTFRGSSEIKLRLVHKKVLLILDDVDSVKQLESLAGGHDWFGPGSRIIVTTRDADVLHKHDVEIKTYKLEELNHDESIELFCWYAFNMSRPVDDFANISSHAISYAKGIPLALRVIGSNLKGKSIEEWDIELQKYKKVPDAEIQGVLEISYKCLSDLDQKIFLDIACFFKGERWDYVKRILDACDFFPIIRVFVNKCLITVDENGCLEMHDLIQDMGREIVRKESTSNPGERSRLWSHKDVLNVLKGNLGSTIVEGIMLDPPKQEKVDHWAYDAFQKMKNLRILIVRNTLFSSGPSYLPNSLRLLDWKCYPSKNFPANFYPQKIVDFKLPHSSIILKNPFQIFEDLTFINLSHSQSITQIPDLSGANNLRVFTVDKCRKLVMFDISIGFMPNLVYLSAYGCPELKSFVPKMYLPSLQVLSFNYCKKFEHFPHVMQKMDTPLKIHMINTAIKKFPNSIGNLTGLEYIDMSICKELKDLSSSFLLLPKLVTLKIDGCSQLGQSFQQFKEHHSMANGYPNLETLHFSEANLSYEDVNAIIEKFPNLEDLKLSHNGFVALPNCIRRSMHLKSLDVSFCRNLIEVPELPLSIQKIDARHCQSLTLEASSVLWSKVSQEVQRIQVMMPMPKWEIPEWFDCVCTQEVPLFWARRKFPVVALAFVFQEVKNTDDVSNFVDAMSLLTGVKGWHTVSLHLFIDGQEICSKNCHYFNVGADHVLLCDLRVLFSDEEWQDIDASLGDEWKAIQVQYDSDLILTKWGVYVYKQETSMDDIQFLPPNRNSFSYTSSSCLVPKGSPEQKMKHMLESFNPRDMFNDCLPLIESEEGPVRSLKVLLRSLRNAKAEVIEKTSSAYGASLKQDHEDSAEDVIQVVEMIKENFSGHFVDLSPEDLQIISRVSERLMRSRVELMEENSLDIGMPIILEYIDASGSTNRRFWGIMEIKLGDPFYKPVLKRYHQLSWALSTSDLRVIIVELKCQPAGEEEASSSSLDESSEDGNYNPELEELMRRIEKDAMSLNKSYGKMKASIVQTDRSVSENYILETLVFRRLIILGKLTMFGLATVFKITPYGKIRQDDDPFRILRICFGCLILVLFVVIIWSFYFIVFVCLSLYRIPMTIIRKLLECGWWLVKQTFMSCKKLHRRIGKNIMSIKGKES 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00682 1420 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 149 IPR035897 -
Trre7g00682 1420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 436 IPR027417 -
Trre7g00682 1420 Gene3D Ribonuclease Inhibitor 540 716 IPR032675 -
Trre7g00682 1420 Gene3D Ribonuclease Inhibitor 717 886 IPR032675 -
Trre7g00682 1420 Coils Coil 1264 1284 - -
Trre7g00682 1420 PRINTS Disease resistance protein signature 206 221 - -
Trre7g00682 1420 PRINTS Disease resistance protein signature 283 297 - -
Trre7g00682 1420 PRINTS Disease resistance protein signature 729 745 - -
Trre7g00682 1420 PRINTS Disease resistance protein signature 377 391 - -
Trre7g00682 1420 ProSiteProfiles TIR domain profile. 7 173 IPR000157 GO:0007165
Trre7g00682 1420 SUPERFAMILY L domain-like 540 903 - -
Trre7g00682 1420 Gene3D - 175 339 IPR027417 -
Trre7g00682 1420 Pfam NB-ARC domain 196 401 IPR002182 GO:0043531
Trre7g00682 1420 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 749 IPR044974 GO:0006952
Trre7g00682 1420 Gene3D - 342 426 IPR042197 -
Trre7g00682 1420 SUPERFAMILY "Winged helix" DNA-binding domain 413 517 IPR036390 -
Trre7g00682 1420 SMART till_3 8 147 IPR000157 GO:0007165
Trre7g00682 1420 Pfam TIR domain 9 176 IPR000157 GO:0007165
Trre7g00682 1420 Gene3D - 3 174 IPR035897 -
Trre7g00682 1420 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00682 Trre-Chr7 4413087 4418158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00682 23 769 WRKY Transcription Factor Family AT4G12020 31.518 1.82e-88 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00682 - - cam:101493067 1865.89