Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00677 ATGGATCATAATAGCAATGGCATTGGCAATGATGAAAGTGAACTATATCATGCTCAACTCCATTTGTACAAACATATATACAGCTTTATAAGTTCCATGGCACTCAAATCTGCTGTGGAGTTAGGCATAGCAGATGTAATCCACAACCATGGAAAACCAATGACTCTTAATGAATTAGCTTCATCTTTGAAACTCCACCCTTCTAAAATCACTGTCCTCTATCGCTTCATGCGATTGTTAACACACAATGGTTTCTTCGCAAAAACAACCGCGATAAAGAAGAAAACAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAACAACATATGCTCTCACACCTCCTTCAAAGCTTCTCGTCCGCGGTGCATCAACATGTTTAGCATCCCTTGCCGGTAGTCATCCAAGTTGTATGGACATGTGGCATTCCTCGAAGAAATGGTTCACCGAGGACAAAGAACTCAGCTTGTTTGAAAGTGCAAATGGGGATAATTTTTGGAACATGTTGAACAAAGATCCGGAATCTCATAAATTGATGAGTTTGTTTCAAGAGGCTATGGAAGCTGATTCTCAAATGTTTAAGCTTGCACTTAAAAACTGCAAGCATGTGTTTGAAGGTTTGGAGTCTTTGGTTGATGTGGGAGGTGGTACTGGAATTGTGGCAAAACTTATTCAAGAAGTACTTCCTGATATTAAATGCACTGTTTTGGATCAACCACAGGTTGTTGGTAATTTAATTGGAAACAACAATTTGAACTTTGTTGGTGGAGATATGTTCAAATCTATCCCTCATGCAGATGCTGTTTTACTCAAGTGGGTTCTACATGATTGGAATGATGAGCTCTGCTTAAAGATATTGAAGAACAGCAAAGAAGCTATTTCTGGAAAAGGCAAAGATGGAAAGGTTATAATCATTGACATATCAATTGATGAAAAAAGTGATGATCATGACTTGACTGAGTTGCAATTGAATTTTGACATGGTAATGCTGACTTTGTACAATGGAAAAGAAAGAGAGAAAAAAGAATGGGAGAAACTCATATATGATGCAGGCTTCAGCAGCTACAAGATTACTCCTATAAGGGATTTCAAGTCTCTCATTGAAGTTTATCCTTAG 1113 0.3819 MDHNSNGIGNDESELYHAQLHLYKHIYSFISSMALKSAVELGIADVIHNHGKPMTLNELASSLKLHPSKITVLYRFMRLLTHNGFFAKTTAIKKKTGGGGEEEEEETTYALTPPSKLLVRGASTCLASLAGSHPSCMDMWHSSKKWFTEDKELSLFESANGDNFWNMLNKDPESHKLMSLFQEAMEADSQMFKLALKNCKHVFEGLESLVDVGGGTGIVAKLIQEVLPDIKCTVLDQPQVVGNLIGNNNLNFVGGDMFKSIPHADAVLLKWVLHDWNDELCLKILKNSKEAISGKGKDGKVIIIDISIDEKSDDHDLTELQLNFDMVMLTLYNGKEREKKEWEKLIYDAGFSSYKITPIRDFKSLIEVYP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00677 370 PANTHER O-METHYLTRANSFERASE 21 355 IPR016461 GO:0008168
Trre7g00677 370 Pfam O-methyltransferase domain 140 352 IPR001077 GO:0008171
Trre7g00677 370 SUPERFAMILY "Winged helix" DNA-binding domain 12 121 IPR036390 -
Trre7g00677 370 Pfam Dimerisation domain 33 81 IPR012967 GO:0046983
Trre7g00677 370 PIRSF O-mtase 1 370 IPR016461 GO:0008168
Trre7g00677 370 FunFam O-methyltransferase ZRP4 122 370 - -
Trre7g00677 370 Gene3D - 4 118 IPR036388 -
Trre7g00677 370 Gene3D Vaccinia Virus protein VP39 123 370 IPR029063 -
Trre7g00677 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 370 IPR016461 GO:0008168
Trre7g00677 370 FunFam Coniferyl alcohol 9-O-methyltransferase 6 118 - -
Trre7g00677 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 369 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00677 Trre-Chr7 4382290 4383512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00677 8 357 Monolignol Biosynthesis Gene Families AT5G54160 33.146 8.17e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00677 K22588 - tpra:123919691 507.294