Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00671 ATGGGTGCATTTCAAGTCCTCTCCGCCAATACAATCAAGGCACTAAAATCAAGTAATCAAAAAATTGATTTAAATCCATGGGATCTTCAGTTTCTACTTGCTTCAACCAACAAAAGGGGCCTTCTTTATCACCATCCTGTAGCATCAGACCAAATTCAACAGCTAAGACACTCTCTATCTTCAGCCCTTTCCTTTTTCCAACCTCTTGCCGGCCGTCTTAGCATAACGGAACACAAAGACAACACCGCATCGTGTTCCTTAACATGCAATAATGCAGGCATAACCTTTATCCATGCCGCGTCAAAGAATACTTCTATTGCCGACATCCTAGAACCCACCTACGTCCCTTCAGTTGTCCGTTCGTTTTTTCCTTTTATAGGAGCTAGAAACTACGAAGGCACATCAAAACCATTATTAGCGGTTCAAGTTACGGAGTTAGTTGATGGTATCTTCATTGGTTGCACGTTCAACCATGTGGTTGGTGATGGAAACTCCACGTGGAATTTCATTAATTCTTGGGCTGAAATCTCACGTGGTTGTTCTCATCATCAAATATCTAAACCTCCAATACTAGAACGTTGGTTTCCAAATGATATTCAACGGCCCATACGATTTCCTTTCATTGTGGAACCACAAAATCATTCTGATAGGTTGAGTTTTTCGTCATCTGATAACGAAAAACTTCATTTGTCAGAAAGAATATTTCGCTTCACAAAGGAAAAAATTGAGCAACTGAAATCAAAGGTCAACGCGGAGATTAATGATTCCATAAAAGTTTCTTCCCTACAAGCGGTTTTAACTCATCTTTGGCGCTGTGTGATCCGTTCTAAACATCTTGATCCACAAGAAGACGTCTACAATATGTTCGTGATAGGAGTTAGACATAGGTTCGATCCACAATTGCCAGAAGATTATTTTGGAAACGCGATTATAGGTTGTGGGGTTAAAATGAAAGTTGTAGATTTATTGAAGGAAGGTGGGCTTGGTAAAGGTGCTTGGGAGATGAACAAGTTAATTGCTTCACACTCTAATGAGAAATTAAAAAATCATTATGAGTCTTGGTTGAGAAATCCAAACTTTATTACATCTGCTAGCATGATCAATAAAGATTTCTTGGCCACTACCAGCTCTCCATGGTTTGATGTTTATGGTAATGATTTTGGATGGGGAAAGCCTGTTGCAGTTCGTAGTGGCAATAACATAAATGGATTTGTTAGTGCATTTTCTGGAATAGAAGAAGGTAGTATCAATCTTCAAGTGTGTCTTCCTTACAAAATTTTGGAGGCCACGGGAAATGACCATGAGTTTATGGAGGTTGTGTCCAACTAA 1329 0.3935 MGAFQVLSANTIKALKSSNQKIDLNPWDLQFLLASTNKRGLLYHHPVASDQIQQLRHSLSSALSFFQPLAGRLSITEHKDNTASCSLTCNNAGITFIHAASKNTSIADILEPTYVPSVVRSFFPFIGARNYEGTSKPLLAVQVTELVDGIFIGCTFNHVVGDGNSTWNFINSWAEISRGCSHHQISKPPILERWFPNDIQRPIRFPFIVEPQNHSDRLSFSSSDNEKLHLSERIFRFTKEKIEQLKSKVNAEINDSIKVSSLQAVLTHLWRCVIRSKHLDPQEDVYNMFVIGVRHRFDPQLPEDYFGNAIIGCGVKMKVVDLLKEGGLGKGAWEMNKLIASHSNEKLKNHYESWLRNPNFITSASMINKDFLATTSSPWFDVYGNDFGWGKPVAVRSGNNINGFVSAFSGIEEGSINLQVCLPYKILEATGNDHEFMEVVSN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00671 442 Gene3D - 4 203 IPR023213 -
Trre7g00671 442 Pfam Transferase family 9 436 - -
Trre7g00671 442 Gene3D - 211 429 IPR023213 -
Trre7g00671 442 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00671 Trre-Chr7 4346786 4348114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00671 53 399 Monolignol Biosynthesis Gene Families AT5G48930 26.271 1.94e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00671 - - gmx:100500257 479.944