Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00657 ATGGCTTTTACTTCCATACAAGCAGCTTATCTTGATGCAGCCAACTGGCAGCAACATGAGCAACAACAAAATCTTCATCAACATCCCGGAAACGGTGGTTCGGTTTCTCAACAACTATTTCAGACACCACCACCAGCACCACCACAGACACAGTCACAACCTCATGGAGGAGCAACTACCGGAGGATCAATTAGGCCGGGATCGATGACTGACAAGGCGAGGACAGCAAACATGCCTATGCCAGAAGCAGCACTGAAATGTCCACGTTGCGAATCGACCAACACAAAATTTTGCTACTTCAACAACTACAGTCTCTCTCAGCCAAGACACTTCTGCAAGACTTGCAGAAGGTATTGGACGAGAGGTGGAGCTCTAAGGAATGTCCCAGTTGGCGGAGGCTTCCGGAGAAACAAGAGATCAAGCAAAAGTAGCAACAATGGTAACTCAACAAAGTCTCCGGCTAGCTCTGACCGCCAAACCGGTAGTGCTAGTTCAACAACATCAATCACTTCCAATAACAATCACTCATCCGCCGATATATTAGGCCTTACACCTCAAATGTCTTCATTAAGGTTCATGACACCATTACATCATAATTTTAATAACCCTAATGATTATGGAGGAGGAGATTTAGGGTTAAACTATGGATTTAGTTACATGGGAGGTGGAGTAGGTGATTTAGGAAGTGCTTTGGTTGGTGGAAATGGTAATTCAATTTTATCCTCAAGTGGTTTGGAACAATGGAGGATGCCTATGCCAATGCCTCAACAACATCAACAATTTCCTTTTTTGGCTAATTTGGAGGGTACAAATGGTAATTTATACCCTTTTGAAGGAAATGTTCAAAATAATGAGATGATTACTAGTGGTGGATATGTGAGGCCAAAGTTGAGTTCAACTTCTGGAATTATGACTCAACTAGCTTCTGTGAAAATGGAAGATAGTATTAATAGGGGCTTTTTGGGAATTAACACCATCAATAATAACAATAATCAAGGAAGTGAACAATATTGGAATAGTGCTGTTGTTATTGGCGGTAACTCTTCTGCAGCTAATTGGAATGATCATGTTTCTGGTTTTAGTTCTTCATCTAATACTACTAGCAATCAGATGTAG 1116 0.4149 MAFTSIQAAYLDAANWQQHEQQQNLHQHPGNGGSVSQQLFQTPPPAPPQTQSQPHGGATTGGSIRPGSMTDKARTANMPMPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTTSITSNNNHSSADILGLTPQMSSLRFMTPLHHNFNNPNDYGGGDLGLNYGFSYMGGGVGDLGSALVGGNGNSILSSSGLEQWRMPMPMPQQHQQFPFLANLEGTNGNLYPFEGNVQNNEMITSGGYVRPKLSSTSGIMTQLASVKMEDSINRGFLGINTINNNNNQGSEQYWNSAVVIGGNSSAANWNDHVSGFSSSSNTTSNQM 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00657 371 MobiDBLite consensus disorder prediction 137 180 - -
Trre7g00657 371 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 54 272 IPR045174 GO:0003700|GO:0006355
Trre7g00657 371 MobiDBLite consensus disorder prediction 19 40 - -
Trre7g00657 371 MobiDBLite consensus disorder prediction 126 180 - -
Trre7g00657 371 ProSiteProfiles Zinc finger Dof-type profile. 85 139 IPR003851 GO:0003677|GO:0006355
Trre7g00657 371 ProSitePatterns Zinc finger Dof-type signature. 87 123 IPR003851 GO:0003677|GO:0006355
Trre7g00657 371 MobiDBLite consensus disorder prediction 52 66 - -
Trre7g00657 371 Pfam Dof domain, zinc finger 84 139 IPR003851 GO:0003677|GO:0006355
Trre7g00657 371 MobiDBLite consensus disorder prediction 19 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00657 Trre-Chr7 4244238 4245583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00657 1 249 C2C2-Dof Transcription Factor Family AT2G37590 46.899 9.62e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Trre7g00657 zf-Dof 3.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00657 - - aip:107628427 309.301