Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00647 ATGGGAAGGCAGAAGCATTCTGATTCAAATTGTAACAATCATGATCCTAAGAGTAAAAGCCTATTTCATATTATTAAGCACCATCCCTTATGTCATCATTTCATACAAAAAAGACATGCATACAAGAAGGATGGTGAGGAAAGAAATGATGCAGGAACTTTACTTGAACAAAGGGATGAGGCCTTTTCTTGTGACAATGGGAAGAACCTAAGCCTTGCCAAGTTAAGAAAATCAAATGTTGAAGAAAAGGTGACACCACATTCTTCAGTTGGAAAAAGATGTGTACAATGTATTGATGCTACATCCAGAAGTGATTACCGGGAATGTAACTTGTGTTGCAAGCTTCACCGACCAACAAAAAACGACTTACTTGCACGAAAAGTAATAGATAAAAAGAGTTATAGAGTGGAAAGTAATGCAAGGAAACACATATTTGGTATTTATACTCATTTATGCAAGCATTTTGTTGGTGGCTTGGAAACAACCAACAAGAACAAGGAAATATTATTAACATTTCTTCATGATCCTGTCTTTCCTACAGTCTATCGCTTCCATAAACAACATGTGCAAAGACGAAAAATGAAACTAAATAGGTCGGAATCATCTCCTTTTCCTTACTCATCATCGAAACCAAAATGGAATGGAATATTATATTGTGACAATATAATACAAAAGTCGGCTCAGCTTGAGCCCTCAAAAACAGCTTATGAACAGGTCATGCCATCGGTAACAAAAGAGAAAGTAAATGGAAATTTCAATATGAGTGAAGGAGTTATAATAGTAAGAAATGTTAAATTTTCTTCGGTATGTACGAAGGGTCAAAATAATCTCAAACAAAAAATAGAGAATGTAACTGGAGAAAGCGAAAAAGAAAAGATTCGCGTTGGGATGGATTCGGTCATTCATAAACTTCCACAAGGTCAAGGGATATCAGATAAATTGAAAGAAGAAATTTTGAAGAAATTGACAGAACCTATTATTACTAGAGAAGTTCGATACAAGAACTCAATAAGAAGAATCATGTCTCTTCAAGAACCATTAGTAAGTTATTGTCAACAAGAGACTCATTCACCGTTGAGAATGTTAATACCTTCTCAAAGAATTCTTTCATTACCTGATCTTCAATCTTTTTCCTATGCTTCTATGAATGGAGATATTTCTGATTTGAATCAAGAAAATCTTGTCATTATAGATGAAAATGATTTGGTGATTAGTAATAATATGAAATCAGGATCAGATTGTATCAATAAGATTAATGGAAAGATGGATTTAATAATTGATGATTTTGAACATAGTAGTTTGAGAAATTGTGGAAATTTCAGTGACCAGGATATTGATGCAAATAAAGAATACAAGGCTGCCATAGCAGCATCAGGTATGTTGACAACCTGTGAAGCACGGACACAGACACCGGATAATGTAGCTTCAAAAATGGAGATTCTAAGCAAGAAATTGAACCATGAAATTCCACATATTGATGTGGACACAAAGTACAAAGATGAATTTAACTATGTGAAATATGTACTTGAAATATCTGGACTCACTAGTAATGAGAGCATTTCAGCATGGCATTCTAAAGATACTCCAGTTGATCCATCACTATATGAAGAAATGGAAAATGATCCTGATTTTTGTGCTAATAAAGGTGATCAATGCAATCACCATGTATTGTTTGATTTAATTAATGAGACAATGTTGGAAATTTATGGAAGGTCACATTGTTACCCTCCTATAGGGTGTCACATTCTCCATAATGTTTGGAGTCATATGAGTAAGTCATTGTGTTTGAGATCTAAAGTTGGTCAAAAAATAGATGATCATATAAGTAGAGATTTATCAAAAAGTGATGGTTGGTTCAATGTTAAGTTGTATGGTGAAGATGTTGGTTTAGAGGTGGAAGACATGATTTTTCATGATCTATTGGTGGAAATAATGTGGGACTTGGCTTGTTTATGA 1956 0.3395 MGRQKHSDSNCNNHDPKSKSLFHIIKHHPLCHHFIQKRHAYKKDGEERNDAGTLLEQRDEAFSCDNGKNLSLAKLRKSNVEEKVTPHSSVGKRCVQCIDATSRSDYRECNLCCKLHRPTKNDLLARKVIDKKSYRVESNARKHIFGIYTHLCKHFVGGLETTNKNKEILLTFLHDPVFPTVYRFHKQHVQRRKMKLNRSESSPFPYSSSKPKWNGILYCDNIIQKSAQLEPSKTAYEQVMPSVTKEKVNGNFNMSEGVIIVRNVKFSSVCTKGQNNLKQKIENVTGESEKEKIRVGMDSVIHKLPQGQGISDKLKEEILKKLTEPIITREVRYKNSIRRIMSLQEPLVSYCQQETHSPLRMLIPSQRILSLPDLQSFSYASMNGDISDLNQENLVIIDENDLVISNNMKSGSDCINKINGKMDLIIDDFEHSSLRNCGNFSDQDIDANKEYKAAIAASGMLTTCEARTQTPDNVASKMEILSKKLNHEIPHIDVDTKYKDEFNYVKYVLEISGLTSNESISAWHSKDTPVDPSLYEEMENDPDFCANKGDQCNHHVLFDLINETMLEIYGRSHCYPPIGCHILHNVWSHMSKSLCLRSKVGQKIDDHISRDLSKSDGWFNVKLYGEDVGLEVEDMIFHDLLVEIMWDLACL 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00647 651 PANTHER PROTEIN TRM32 457 648 IPR044257 -
Trre7g00647 651 Pfam Domain of unknown function (DUF4378) 501 643 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00647 Trre-Chr7 4161590 4164373 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00647 156 637 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 28.929 1.69e-37 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00647 - - mtr:25491599 847.81