Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00646 ATGGGAAGGCAGAAGCATTCTGATTCAAATTGTAACAATCATGATCCTAAGAGTAAAAGCCTATTTCATATTATTAAGCACCATCCCTTATGTCATCATTTCATACAAAAAAGACATGCATACAAGAAGGATGGTGAGGAAAGAAATGATGCAGGAACTTTACTTGAACAAAGGGATGAGGCCTTTTCTTGTGACAATGGGAAGAACCTAAGCCTTGCCAAGTTAAGAAAATCAAATGTTGAAGAAAAGGTGACACCACATTCTTCAGTTGGAAAAAGATGTGTACAATGTATTGATGCTACATCCAGAAGTGATTACCGGGAATGTAACTTGTGTTGCAAGCTTCACCGACCAACAAAAAACGACTTACTTGCACGAAAAGTAATAGATAAAAAGAGTTATAGAGTGGAAAGTAATGCAAGGAAACACATATTTGGTATTTATACTCATTTATGCAAGCATTTTGTTGGTGGCTTGGAAACAACCAACAAGAACAAGGAAATATTATTAACATTTCTTCATGATCCTGTCTTTCCTACAGTCTATCGCTTCCATAAACAACATGTGCAAAGACGAAAAATGAAACTAAATAGGTCGGAATCATCTCCTTTTCCTTACTCATCATCGAAACCAAAATGGAATGGAATATTATATTGTGACAATATAATACAAAAGTCGGCTCAGCTTGAGCCCTCAAAAACAGCTTATGAACAGGTCATGCCATCGGTAACAAAAGAGAAAGTAAATGGAAATTTCAATATGAGTGAAGGAGTTATAATAGTAAGAAATGTTAAATTTTCTTCGGTATGTACGAAGGGTCAAAATAATCTCAAACAAAAAATAGAGAATGTAACTGGAGAAAGCGAAAAAGAAAAGATTCGCGTTGGGATGGATTCGGTCATTCATAAACTTCCACAAGGTCAAGGGATATCAGATAAATTGAAAGAAGAAATTTTGAAGAAATTGACAGAACCTATTATTACTAGAGAAGTTCGATACAAGAACTCAATAAGAAGAATCATGTCTCTTCAAGAACCATTAGTAAGTTATTGTCAACAAGAGACTCATTCACCGTTGAGAATGTTAATACCTTCTCAAAGAATTCTTTCATTACCTGATCTTCAATCTTTTTCCTATGCTTCTATGAATGGAGATATTTCTGATTTGAATCAAGAAAATCTTGTCATTATAGATGAAAATGATTTGGTGATTAGTAATAATATGAAATCAGGATCAGATTGTATCAATAAGATTAATGGAAAGATGGATTTAATAATTGATGATTTTGAACATAGTAGTTTGAGAAATTGTGGAAATTTCAGTGACCAGGATATTGATGCAAATAAAGAATACAAGGCTGCCATAGCAGCATCAGGTATGTTGACAACCTGTGAAGCACGGACACAGACACCGGATAATGTAGCTTCAAAAATGGAGATTCTAAGCAAGAAATTGAACCATGAAATTCCACATATTGATGTGGACACAAAGTACAAAGATGAATTTAACTATGTGAAATATGTACTTGAAATATCTGGACTCACTAGTAATGAGAGCATTTCAGCATGGCATTCTAAAGATACTCCAGTTGATCCATCACTATATGAAGAAATGGAAAATGATCCTGATTTTTGTGCTAATAAAGGGTGTCACATTCTCCATAATGTTTGGAGTCATATGAGTAAGTCATTGTGTTTGAGATCTAAAGTTGGTCAAAAAATAGATGATCATATAAGTAGAGATTTATCAAAAAGTGATGGTTGGTTCAATGTTAAGTTGTATGGTGAAGATGTTGGTTTAGAGGTGGAAGACATGATTTTTCATGATCTATTGGTGGAAATAATGTGGGACTTGGCTTGTTTATGA 1866 0.3398 MGRQKHSDSNCNNHDPKSKSLFHIIKHHPLCHHFIQKRHAYKKDGEERNDAGTLLEQRDEAFSCDNGKNLSLAKLRKSNVEEKVTPHSSVGKRCVQCIDATSRSDYRECNLCCKLHRPTKNDLLARKVIDKKSYRVESNARKHIFGIYTHLCKHFVGGLETTNKNKEILLTFLHDPVFPTVYRFHKQHVQRRKMKLNRSESSPFPYSSSKPKWNGILYCDNIIQKSAQLEPSKTAYEQVMPSVTKEKVNGNFNMSEGVIIVRNVKFSSVCTKGQNNLKQKIENVTGESEKEKIRVGMDSVIHKLPQGQGISDKLKEEILKKLTEPIITREVRYKNSIRRIMSLQEPLVSYCQQETHSPLRMLIPSQRILSLPDLQSFSYASMNGDISDLNQENLVIIDENDLVISNNMKSGSDCINKINGKMDLIIDDFEHSSLRNCGNFSDQDIDANKEYKAAIAASGMLTTCEARTQTPDNVASKMEILSKKLNHEIPHIDVDTKYKDEFNYVKYVLEISGLTSNESISAWHSKDTPVDPSLYEEMENDPDFCANKGCHILHNVWSHMSKSLCLRSKVGQKIDDHISRDLSKSDGWFNVKLYGEDVGLEVEDMIFHDLLVEIMWDLACL 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00646 621 PANTHER PROTEIN TRM32 452 545 IPR044257 -
Trre7g00646 621 Pfam Domain of unknown function (DUF4378) 548 613 IPR025486 -
Trre7g00646 621 Pfam Domain of unknown function (DUF4378) 501 541 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00646 Trre-Chr7 4161590 4164373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00646 156 607 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 25.357 1.27e-21 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00646 - - mtr:25491599 785.793