Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00645 ATGGGAAGGCAGAAGCATTCTGATTCAAATTGTAACAATCATGATCCTAAGAGTAAAAGCCTATTTCATATTATTAAGCACCATCCCTTATGTCATCATTTCATACAAAAAAGACATGCATACAAGAAGGATGGTGAGGAAAGAAATGATGCAGGAACTTTACTTGAACAAAGGGATGAGGCCTTTTCTTGTGACAATGGGAAGAACCTAAGCCTTGCCAAGTTAAGAAAATCAAATGTTGAAGAAAAGGTGACACCACATTCTTCAGTTGGAAAAAGATGTGTACAATGTATTGATGCTACATCCAGAAGTGATTACCGGGAATGTAACTTGTGTTGCAAGCTTCACCGACCAACAAAAAACGACTTACTTGCACGAAAAGTAATAGATAAAAAGAGTTATAGAGTGGAAAGTAATGCAAGGAAACACATATTTGTCTATCGCTTCCATAAACAACATGTGCAAAGACGAAAAATGAAACTAAATAGGTCGGAATCATCTCCTTTTCCTTACTCATCATCGAAACCAAAATGGAATGGAATATTATATTGTGACAATATAATACAAAAGTCGGCTCAGCTTGAGCCCTCAAAAACAGCTTATGAACAGGTCATGCCATCGGTAACAAAAGAGAAAGTAAATGGAAATTTCAATATGAGTGAAGGAGTTATAATAGTAAGAAATGTTAAATTTTCTTCGGTATGTACGAAGGGTCAAAATAATCTCAAACAAAAAATAGAGAATGTAACTGGAGAAAGCGAAAAAGAAAAGATTCGCGTTGGGATGGATTCGGTCATTCATAAACTTCCACAAGGTCAAGGGATATCAGATAAATTGAAAGAAGAAATTTTGAAGAAATTGACAGAACCTATTATTACTAGAGAAGTTCGATACAAGAACTCAATAAGAAGAATCATGTCTCTTCAAGAACCATTAGTAAGTTATTGTCAACAAGAGACTCATTCACCGTTGAGAATGTTAATACCTTCTCAAAGAATTCTTTCATTACCTGATCTTCAATCTTTTTCCTATGCTTCTATGAATGGAGATATTTCTGATTTGAATCAAGAAAATCTTGTCATTATAGATGAAAATGATTTGGTGATTAGTAATAATATGAAATCAGGATCAGATTGTATCAATAAGATTAATGGAAAGATGGATTTAATAATTGATGATTTTGAACATAGTAGTTTGAGAAATTGTGGAAATTTCAGTGACCAGGATATTGATGCAAATAAAGAATACAAGGCTGCCATAGCAGCATCAGGTATGTTGACAACCTGTGAAGCACGGACACAGACACCGGATAATGTAGCTTCAAAAATGGAGATTCTAAGCAAGAAATTGAACCATGAAATTCCACATATTGATGTGGACACAAAGTACAAAGATGAATTTAACTATGTGAAATATGTACTTGAAATATCTGGACTCACTAGTAATGAGAGCATTTCAGCATGGCATTCTAAAGATACTCCAGTTGATCCATCACTATATGAAGAAATGGAAAATGATCCTGATTTTTGTGCTAATAAAGGTGATCAATGCAATCACCATGTATTGTTTGATTTAATTAATGAGACAATGTTGGAAATTTATGGAAGGTCACATTGTTACCCTCCTATAGGGTGTCACATTCTCCATAATGTTTGGAGTCATATGAGTAAGTCATTGTGTTTGAGATCTAAAGTTGGTCAAAAAATAGATGATCATATAAGTAGAGATTTATCAAAAAGTGATGGTTGGTTCAATGTTAAGTTGTATGGTGAAGATGTTGGTTTAGAGGTGGAAGACATGATTTTTCATGATCTATTGGTGGAAATAATGTGGGACTTGGCTTGTTTATGA 1851 0.3398 MGRQKHSDSNCNNHDPKSKSLFHIIKHHPLCHHFIQKRHAYKKDGEERNDAGTLLEQRDEAFSCDNGKNLSLAKLRKSNVEEKVTPHSSVGKRCVQCIDATSRSDYRECNLCCKLHRPTKNDLLARKVIDKKSYRVESNARKHIFVYRFHKQHVQRRKMKLNRSESSPFPYSSSKPKWNGILYCDNIIQKSAQLEPSKTAYEQVMPSVTKEKVNGNFNMSEGVIIVRNVKFSSVCTKGQNNLKQKIENVTGESEKEKIRVGMDSVIHKLPQGQGISDKLKEEILKKLTEPIITREVRYKNSIRRIMSLQEPLVSYCQQETHSPLRMLIPSQRILSLPDLQSFSYASMNGDISDLNQENLVIIDENDLVISNNMKSGSDCINKINGKMDLIIDDFEHSSLRNCGNFSDQDIDANKEYKAAIAASGMLTTCEARTQTPDNVASKMEILSKKLNHEIPHIDVDTKYKDEFNYVKYVLEISGLTSNESISAWHSKDTPVDPSLYEEMENDPDFCANKGDQCNHHVLFDLINETMLEIYGRSHCYPPIGCHILHNVWSHMSKSLCLRSKVGQKIDDHISRDLSKSDGWFNVKLYGEDVGLEVEDMIFHDLLVEIMWDLACL 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00645 616 PANTHER PROTEIN TRM32 148 317 IPR044257 -
Trre7g00645 616 Pfam Domain of unknown function (DUF4378) 466 608 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00645 Trre-Chr7 4161590 4164373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00645 220 602 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 31.096 2.87e-37 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00645 - - mtr:25491599 784.252