Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00623 ATGAACATGATGGTTCTTCCTTCTCTTCTGCTTTTCAGTTTGCAGATATTAACTCACATTGAAGCTTATGGCTCAAAGGTTAAAGTGCTTCCTGGTTTTCAAGGCCCTCTTCCTTTTGAGCTTGAAACAGGGTATGTGGGATTGGGGGAAACAGATGATGACATGCAAGTGTTCTATTATTTTATCAAATCAGAGAATGATCCTAAGAAAGATCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGTTGTTCTTCTTTTTCTGGCCTTGTCTCTGAAATAGGTCCATTTGAATTTAAAAACAAGGAGTACGACGGGAGCGTGCCTAGTTTGGTCTCGAGGCCACAATCATGGACAAAGCTATGCAACATTATTTTTGCAGATTTGCCACTTGGAACTGGTTTCTCATATGCGAAAAATCTCACTGCTCACCGAAGCGATTGGAAATTAGTTCACCATGCTCATCAATTTCTTAGGAAGTGGCTGATCGATCACCCTGAATTTCTTTCAAATGAGTTCTACTTTGGTGGTGATTCATACTCTGGAATTCCTGTCCCGGCCATTGTTCAAGAAATTTCAAATGGAAATGAAAAAGGTCTCCAACCATTGATAAATCTTCAGGGATATCTGCTAGGGAACCCCGTCACAACACGCAGAGAAGCTAATGATAAAATCCAATATGCTCATGGAATGGGACTCATTTCTGATGAACTCTATGCGTCGCTGCAGAAAAATTGTAAAGGAGAATATATTGATGTAGATTCCAGAAATGACTTGTGTTTAAGAGATCTTCAGTACTTTGATGAGTGCCTTTCAAGAATTGATGAGTACTTCATTTTGGATCCCTATTGCAAAGATGATTCGCCACTCTGGAGGAGATCATTGACTCAAGAGTTGAAGGAATCTCTTAGTTCTCATCTCACAGCGCCAGGATTAAGCTGCCGAACTTATGAATTTTACCTCACCACTAAATGGGCTAACGATGAGCGTGTTCGCAAGGCACTGCATATTCGAGAGGGAACCATAAGGAAATGGACACGCTGTTACAGGACTGATTTTGAGAATGAGATCTTTAGTAGCTTCGAGTTTCATGCGAATCTAAGCAAAAACGGATATCGCTCTTTGATATACAATGGGGATCATGATTCAGTGGTTCCTTTCATCTCTACTCAAGCTTGGATAAGAGCTCTAAACTACTCCATTGTGGATGATTGGAGACCATGGTTTGTAGATGGCCAAGTGGGAGGATATACAAGGACTTACTCGAATCAAATGACATTTGCAACTGTGAAGGGTTCAGGACATACAGCTCCTGACTATACTCCAGAGCAATGTTTTGCCATGTTCACTAAGTGGATATCTAAGTTGCCTTTGTAA 1374 0.409 MNMMVLPSLLLFSLQILTHIEAYGSKVKVLPGFQGPLPFELETGYVGLGETDDDMQVFYYFIKSENDPKKDPLMLWLTGGPGCSSFSGLVSEIGPFEFKNKEYDGSVPSLVSRPQSWTKLCNIIFADLPLGTGFSYAKNLTAHRSDWKLVHHAHQFLRKWLIDHPEFLSNEFYFGGDSYSGIPVPAIVQEISNGNEKGLQPLINLQGYLLGNPVTTRREANDKIQYAHGMGLISDELYASLQKNCKGEYIDVDSRNDLCLRDLQYFDECLSRIDEYFILDPYCKDDSPLWRRSLTQELKESLSSHLTAPGLSCRTYEFYLTTKWANDERVRKALHIREGTIRKWTRCYRTDFENEIFSSFEFHANLSKNGYRSLIYNGDHDSVVPFISTQAWIRALNYSIVDDWRPWFVDGQVGGYTRTYSNQMTFATVKGSGHTAPDYTPEQCFAMFTKWISKLPL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00623 457 FunFam Carboxypeptidase 312 456 - -
Trre7g00623 457 FunFam Serine carboxypeptidase-like 11 21 457 - -
Trre7g00623 457 SUPERFAMILY alpha/beta-Hydrolases 28 456 IPR029058 -
Trre7g00623 457 Pfam Serine carboxypeptidase 31 453 IPR001563 GO:0004185|GO:0006508
Trre7g00623 457 Gene3D alpha/beta hydrolase 27 456 IPR029058 -
Trre7g00623 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Trre7g00623 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Trre7g00623 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Trre7g00623 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Trre7g00623 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 441 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00623 Trre-Chr7 3967672 3971610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00623 19 50 Calmodulin-binding Proteins AT2G22960 65.625 2.45e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00623 K16296 - tpra:123922058 799.66