Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00622 ATGAACATGATTGTTCTTCCTTCTCATAATTCATTTCACCATTGTTGTCAGATTCTACTTGCTCTTCTGCTTTTCAGTTTGCATGTATTAATTCACATTGAAGCTTATGGCTCAAAGGTTGAAGTGCTTCCTGGTTTTCAAGGCCCTCTTCCTTTTGAACTTGAAACAGGGTACGTCGGTTTAGGGGAAACAGATGATGACATGCAAGTGTTCTACTATTTTTTCAAATCAGAGAATAATCCTAAGAAAGACCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGTTGTTCTTCTTTTTCTGGCCTTGTCTATCAAATAGGTCCATTTGAATTTGAAATCAAGGAGTACAACGGCAGCGTGCCTAGTTTGGTCTCGAGGCCACAGTCATGGACAAAGCTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATCTCACTGCTCACCGAAGCGATTGGAAATTAGTTCACCATGCTCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCTGAATTTCTTTCAAATGAATTCTACATTGGAGCTGATTCATACTCTGGCATTCCTGTCCCGGCGATTCTTCAAGTAATTTCAAATGGAAATGAAAAAGGTCTCCAACCATTGATAAATCTTCAGGGATATATGCTAGGGAATCCCATGACAACACACAGAGAACCTAATGATCAAATCCCATATGCTCATGGAATGGGACTCATTTCAGATGAACTTTATGCGTCATTGCAGAAAAATTGTAAAGGAGAATATATTGATGTAGATTCCAGAAATGAGTTGTGTTTAAGAGATCTTCGGTACTTTGATGAGTGTCTTTCAGGAATTAATAAGTTCCACATTTTGGATCGCTATTGTGAAGATAATTCTCATCTTTGGAGGAGATCATTGACTCAAGAGTTGAAGGAATCTCATAGTTCACATCTCACAGTGCCTGAATTAAGCTGCCAAATTTATGGATTTTACCTCGCCACTAAATGGGCTAACGATGAGCGTGTACGCAAGGCACTGCATATTCGAGAGGGAACCATACAGAAATGGGAACGTTGTTACACTACTGATTTTGAGCATGAGATATTTAGTAGCGTTGAGTTTCATGCAAATCTAAGCAAAAAAGGATACCGCTCTTTGATATACAGTGGAGATCATGATGCAGTTGTTCCTTTCATGTCTACTCAAGCTTGGATAAGGGCTCTAAACTACTCCATTGTTGATGATTGGAGGCCATGGTTTGTAAATGGCCAAGTGGGAGGGTACACAAGGACTTACTCAAATCGAATGACATTTGCAACTGTGAAGGGTTCAGGACATACAGCTCCTGAGTACACTCCTGAGCAATGTTTTGCCATGTTCACTAAGTGGATATCTCAACTTCTTTTGTAA 1413 0.3963 MNMIVLPSHNSFHHCCQILLALLLFSLHVLIHIEAYGSKVEVLPGFQGPLPFELETGYVGLGETDDDMQVFYYFFKSENNPKKDPLMLWLTGGPGCSSFSGLVYQIGPFEFEIKEYNGSVPSLVSRPQSWTKLCSIIFVDLPLGTGFSYAKNLTAHRSDWKLVHHAHQFLRKWLIDHPEFLSNEFYIGADSYSGIPVPAILQVISNGNEKGLQPLINLQGYMLGNPMTTHREPNDQIPYAHGMGLISDELYASLQKNCKGEYIDVDSRNELCLRDLRYFDECLSGINKFHILDRYCEDNSHLWRRSLTQELKESHSSHLTVPELSCQIYGFYLATKWANDERVRKALHIREGTIQKWERCYTTDFEHEIFSSVEFHANLSKKGYRSLIYSGDHDAVVPFMSTQAWIRALNYSIVDDWRPWFVNGQVGGYTRTYSNRMTFATVKGSGHTAPEYTPEQCFAMFTKWISQLLL 470
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00622 470 FunFam Serine carboxypeptidase-like 11 34 470 - -
Trre7g00622 470 FunFam Carboxypeptidase 373 467 - -
Trre7g00622 470 Gene3D alpha/beta hydrolase 41 469 IPR029058 -
Trre7g00622 470 SUPERFAMILY alpha/beta-Hydrolases 43 467 IPR029058 -
Trre7g00622 470 Pfam Serine carboxypeptidase 44 467 IPR001563 GO:0004185|GO:0006508
Trre7g00622 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
Trre7g00622 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Trre7g00622 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Trre7g00622 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Trre7g00622 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 454 IPR001563 GO:0004185|GO:0006508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre7g00622 Trre-Chr7 3961722 3966898 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00622 32 63 Calmodulin-binding Proteins AT2G22960 65.625 8.64e-07 47.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00622 K16296 - tpra:123922058 828.935