Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00621 ATGCAAGTGTTCTATTATTTTATCAAATCAGAGAATGATCCTAAGAAAGACCCTCTTATGCTTTGGTTAACTGGTGGTCCAGGTTGTTCTTCTTTTTCTGGCCTTGTCTATCAAATAGGTCCAGTTAAATTCGAAACCAAGGAGTATGATGGGAGCGTGCCTAGTTTGGTCTTGAGGCCACAGTCATGGACAAAGCTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCTAAAAATCTCACTGCTCACCGAAGCGATTGGAAATTAGTTCACCATGCTCATCAATTTCTTAGGAAGTGGTTGATTGATCACCCTGAATTTCTTTCAAATGAATTCTACATTGGAGCTGATTCATACTCTGGCATTCCTGTCCCGGCCATTCTTCAAGAAATTTCAAATGGAAATGAAAAAGGTCTCCAACCATTGATAAATCTTCAGGGATATCTGCTAGGGAACCCCATCACAACACACAGAGAAGATAATGATAAAATCCAATATGCTCATGGAATGGGACTCATTTCTGATGAACTCTACGCGTCACTGCAAAATAATTGTAAAGGAGAGTATATTGATGTAGATTCCAGAAATGTATTGTGCTTAAGAGATCTCCGATACTTCGATGAAAGCCTTTCAGGAATTAACACGTTCAACATTTTGGATCGCTATTGTGAAGATGATACTCGTCTCTGGAGGAGATCATTAATGACTCAGGAGTTGAAGAAATCGTCTAGTTCTCGTCTCACCGTGCCTGAATTAAGCTGCCAAATATATAGTTTTTACCTGACTACTAAATGGGCTAACAATGAGCGTGTTCGCAAGGCACTGCATATTCGAGAGGGAACCATACGGAAATGGGAACGTTGTTACACTACTGATTTTGAGCATGAGATCTTTAGTAGCGTTGAGTTTCATGCAAATCTAAGTAAAAAAGGATACCGCTCTTTGATATACAGTGGAGATCATGATGCAGAAGTTCCTTTCATGTCTACTCAAGCTTGGATAAGGGCTCTAAACTACTCCATTGTGGATGATTGGAGACCATGGTTTGTAAATGAACAAGTGGGAGGATACACAAGGACTTACTCGAATCGAATGACATTTGCAACTGTGAAGATTCTACTTGCTCTTCTGCTTTTTAGTTTGCAGATATTAACTCACATTGAAGCTTATGGCTCAAAGGTTAAAGTGCTTCCTGGTTTTCAAGGGTCTCTTCCTTTTGAGCTTGAAACAGGGTATGTGGGAGTGGGGGAAACAGATGATGACATGCAAGTGTTCTATTATTTTATCAAATCAGAGAATAATCCTAAGAAAGACCCTCTTATGCTTTGGTTAAGTGGTGGTCCTGGTTGTTCCTCTTTATCTGGCCTTGCCTCTCAAATAGGTCCATTTGAATTTGAAAACAAGGAGTACGACGGGAGCGTGCCTAGTTCGGTCTCGAGGCCACAATCATGGACAAAGCTATCCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCGAAAAATCTCACTGCTCACCGAAGTGACTGGAAATTAGTTCACCATGCTCATAAATTTCTTAGGAAGTGGCTGATTGATCACCCTGAATTTCTTTCAAATGAATTCTACATTGGAGCTGATTCATACTCTGGCATTCCTGTCCCGGCAATTCTTCAAGAAATTTCAAATGGAAATGAAAAAGGTCTCCAACCATTGATAAATCTTCAGGGATATATGCTAGGGAATCCAATGACAACATACAGAGAACATAATGATCAAATCCAATATGCTCATGGAATGGCACTCATTTCGGATGAACTTTATGCGTCGTTGCAGAAAAATTGTAAAGGAGAATATATTGATGTAGATTCCAGAAATGAGTTATGTTTAAAAGATCTTCAGTACTTTGATGAGTGCCTTTCAGGAATTGATACGTTCAACATTTTGGATCCCTATTGCAAAGACGATTCGCATCTTTGGAGGAGATCATTGACTGAGGAGTTGAAGGAATCTCTTATTTCTCATCTCACAGTGCCTGAACTAAGCTGCCATAGTTATAGTTCTTACCTCGCCACTAAATGGGCTAACGATGACCATGTTCGCAAGGCACTGCATATTCGAGAGGGAACCATAGGGAAATGGGAACGTTGTTACAAGACTGATTTTGAGTTCGAGATCTTTAGTAGCTTTGAGTTTCATGCAAATCTAAGCAAAAAAGGATACCGCTCTTTGATATACAGTGGAGATCATGATGCAGAAGTTCCTTTCATGTCTACTCAAGCTTGGATAAGGGCTCTAAACTACTCCATTGTTGATGATTGGAGGCCATGGTTTGTAAATGGCCAAGTCGGAGGATACACTAGGACTTACTCGAATCGAATGACCTTTGCAACCGTAAAGGGTTCAGGACATACAGCTCCTGAGGTCACTCCAGATCAATGTTTTGCTATGTTCACTAAGTGGATATCTAAATTGCCTTTGTAA 2493 0.3999 MQVFYYFIKSENDPKKDPLMLWLTGGPGCSSFSGLVYQIGPVKFETKEYDGSVPSLVLRPQSWTKLCSIIFVDLPLGTGFSYAKNLTAHRSDWKLVHHAHQFLRKWLIDHPEFLSNEFYIGADSYSGIPVPAILQEISNGNEKGLQPLINLQGYLLGNPITTHREDNDKIQYAHGMGLISDELYASLQNNCKGEYIDVDSRNVLCLRDLRYFDESLSGINTFNILDRYCEDDTRLWRRSLMTQELKKSSSSRLTVPELSCQIYSFYLTTKWANNERVRKALHIREGTIRKWERCYTTDFEHEIFSSVEFHANLSKKGYRSLIYSGDHDAEVPFMSTQAWIRALNYSIVDDWRPWFVNEQVGGYTRTYSNRMTFATVKILLALLLFSLQILTHIEAYGSKVKVLPGFQGSLPFELETGYVGVGETDDDMQVFYYFIKSENNPKKDPLMLWLSGGPGCSSLSGLASQIGPFEFENKEYDGSVPSSVSRPQSWTKLSSIIFVDLPLGTGFSYAKNLTAHRSDWKLVHHAHKFLRKWLIDHPEFLSNEFYIGADSYSGIPVPAILQEISNGNEKGLQPLINLQGYMLGNPMTTYREHNDQIQYAHGMALISDELYASLQKNCKGEYIDVDSRNELCLKDLQYFDECLSGIDTFNILDPYCKDDSHLWRRSLTEELKESLISHLTVPELSCHSYSSYLATKWANDDHVRKALHIREGTIGKWERCYKTDFEFEIFSSFEFHANLSKKGYRSLIYSGDHDAEVPFMSTQAWIRALNYSIVDDWRPWFVNGQVGGYTRTYSNRMTFATVKGSGHTAPEVTPDQCFAMFTKWISKLPL 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00621 830 Gene3D alpha/beta hydrolase 394 667 IPR029058 -
Trre7g00621 830 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 399 814 IPR001563 GO:0004185|GO:0006508
Trre7g00621 830 SUPERFAMILY alpha/beta-Hydrolases 2 376 IPR029058 -
Trre7g00621 830 FunFam Serine carboxypeptidase-like 19 1 234 - -
Trre7g00621 830 FunFam Carboxypeptidase 685 829 - -
Trre7g00621 830 FunFam Serine carboxypeptidase-like 11 394 830 - -
Trre7g00621 830 SUPERFAMILY alpha/beta-Hydrolases 401 829 IPR029058 -
Trre7g00621 830 Pfam Serine carboxypeptidase 2 377 IPR001563 GO:0004185|GO:0006508
Trre7g00621 830 Pfam Serine carboxypeptidase 404 826 IPR001563 GO:0004185|GO:0006508
Trre7g00621 830 Gene3D - 685 829 - -
Trre7g00621 830 PRINTS Carboxypeptidase C serine protease (S10) family signature 797 810 IPR001563 GO:0004185|GO:0006508
Trre7g00621 830 PRINTS Carboxypeptidase C serine protease (S10) family signature 486 498 IPR001563 GO:0004185|GO:0006508
Trre7g00621 830 PRINTS Carboxypeptidase C serine protease (S10) family signature 499 509 IPR001563 GO:0004185|GO:0006508
Trre7g00621 830 PRINTS Carboxypeptidase C serine protease (S10) family signature 533 558 IPR001563 GO:0004185|GO:0006508
Trre7g00621 830 Gene3D alpha/beta hydrolase 1 378 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00621 Trre-Chr7 3945472 3959791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00621 693 830 Calmodulin-binding Proteins AT2G22960 59.712 1.69e-53 182