Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00618 ATGGTTCCTCCTTCTCATAGTTCACTCTACTATTGTTTTCAGATTCTACTTGCTCTTGTGCTTCTTAGTTTGCAGCTGGAAGCTTCTAGTTCTAGCTCAAAGGTTGAAGTGCTTCCTGGTTTTGAAGGGCCTCTACCTTTTGAACTTGAAACAGGGTATGTGGGATTAGGGGAACCAGATGATGATGATGATATGCAAGTGTTCTATTATTTTATCAAATCAGAGAATGATCCTAAGAAAGACCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGTTGTTCTTCTTTTTCTGGCCTTGTCTATCAAATTGGCCCCGTTGAATTCGAAATCAAGGAGTACAACGGCAGCGTGCCTAGTTTGGTCTTGAGGCCACAATCATGGACAAAGCTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCCAAAAATCTCACTGCTCACCGAAGTGACTGGAAATTAGTTCACCATACTCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCTGAATTTCTTTCAAATGAATTCTACTTTGGTGCTGATTCATACTCCGGTATTCCTGTACCGGCCATTGTTCAAGAGATTTCAAATGGAAACGAAGAAGGTCTTCAGCCATCGATAAACCTTCAGGGATATCTGCTAGGGAACCCGATAACAACACGAAGAGAAAAAAATTATCAAATCTCATATGCTCATGGAATGGGACTCATCTCTGATGAACTCTATGCATCACTGCAGAAAAATTGTAAAGGAGAGTATATTGACGTCGATTCCAGAAATGAGTTGTGTTTAAGAGATCTCCAGTCATTTGATGAGAACCTTTCAGGAATTAATCAGTTCTACATTTTGGATAGCTATTGCGAAAACGATACACCACTCTGGAGGAGATCATTGAGTCATGAGTTGAAGAAATCTTCTAGTTCTCATCTCACAGTGCCTGAATTAAGCTGCCGAATTTATAGTTCTTACCTCGGTGTTAAGTGGATTAACGATGAGCGTGTTCGCAAGGCACTGCATATCCGAGAGGGAACCATAGGGAAATGGGTACGTTGTTACAAGACTGATTTTGAGTATGAGATCTTTGATAGCTTTGAGTTTCATGCAAATCTAAGCAAAAAAGGATATCGCTCTTTGATATACAGTGGAGATCATGATGCAGTTGTTCCTTTCATGTCTACTCAAGCTTGGATAAGGGCTCTAAACTACTCCATTGTTGATGATTGGAGGCCTTGGTTTGTAAATGGCCAAGTGGGAGGATACACAAGGACTTACTCGAATCGAATGACATTTGCAACTGTGAAGGGTTCGGGACATATGGCTCCCGAGTACACTCCCGAGCAATGTTTTTCCATGTTGACTAAGTGGATATTGAATTTGCCTTTGTAA 1404 0.4081 MVPPSHSSLYYCFQILLALVLLSLQLEASSSSSKVEVLPGFEGPLPFELETGYVGLGEPDDDDDMQVFYYFIKSENDPKKDPLMLWLTGGPGCSSFSGLVYQIGPVEFEIKEYNGSVPSLVLRPQSWTKLCSIIFVDLPLGTGFSYAKNLTAHRSDWKLVHHTHQFLRKWLIDHPEFLSNEFYFGADSYSGIPVPAIVQEISNGNEEGLQPSINLQGYLLGNPITTRREKNYQISYAHGMGLISDELYASLQKNCKGEYIDVDSRNELCLRDLQSFDENLSGINQFYILDSYCENDTPLWRRSLSHELKKSSSSHLTVPELSCRIYSSYLGVKWINDERVRKALHIREGTIGKWVRCYKTDFEYEIFDSFEFHANLSKKGYRSLIYSGDHDAVVPFMSTQAWIRALNYSIVDDWRPWFVNGQVGGYTRTYSNRMTFATVKGSGHMAPEYTPEQCFSMLTKWILNLPL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00618 467 FunFam Carboxypeptidase 369 464 - -
Trre7g00618 467 SUPERFAMILY alpha/beta-Hydrolases 38 466 IPR029058 -
Trre7g00618 467 Gene3D alpha/beta hydrolase 35 466 IPR029058 -
Trre7g00618 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Trre7g00618 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Trre7g00618 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Trre7g00618 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Trre7g00618 467 Pfam Serine carboxypeptidase 39 463 IPR001563 GO:0004185|GO:0006508
Trre7g00618 467 FunFam Serine carboxypeptidase-like 11 29 467 - -
Trre7g00618 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 451 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00618 Trre-Chr7 3922759 3927630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00618 29 64 Calmodulin-binding Proteins AT2G22960 58.333 5.30e-07 48.1