Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00617 ATGGAACATTTAAAGAAGAGTGAAGAGATGAAGAACATGATGGTTCCTCCTTCTCATAGTTCACTCTACTATTGTTTTCAGATTCTACTTGCTCTTGTGCTTCTTAGTTTGCAGCTGGAAGCTTCTAGTTCTAGCTCAAAGGTTGAAGTGCTTCCTGGTTTTGAAGGGCCTCTACCTTTTGAACTTGAAACAGGGTATGTGGGATTAGGGGAACCAGATGATGATGATGATATGCAAGTGTTCTATTATTTTATCAAATCAGAGAATGATCCTAAGAAAGACCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGTTGTTCTTCTTTTTCTGGCCTTGTCTATCAAATTGGCCCCGTTGAATTCGAAATCAAGGAGTACAACGGCAGCGTGCCTAGTTTGGTCTTGAGGCCACAATCATGGACAAAGCTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCCAAAAATCTCACTGCTCACCGAAGTGACTGGAAATTAGTTCACCATACTCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCTGAATTTCTTTCAAATGAATTCTACTTTGGTGCTGATTCATACTCCGGTATTCCTGTACCGGCCATTGTTCAAGAGATTTCAAATGGAAACGAAGAAGGTCTTCAGCCATCGATAAACCTTCAGGGATATCTGCTAGGGAACCCGATAACAACACGAAGAGAAAAAAATTATCAAATCTCATATGCTCATGGAATGGGACTCATCTCTGATGAACTCTATGCATCACTGCAGAAAAATTGTAAAGGAGAGTATATTGACGTCGATTCCAGAAATGAGTTGTGTTTAAGAGATCTCCAGTCATTTGATGAGAACCTTTCAGGAATTAATCAGTTCTACATTTTGGATAGCTATTGCGAAAACGATACACCACTCTGGAGGAGATCATTGAGTCATGAGTTGAAGAAATCTTCTAGTTCTCATCTCACAGTGCCTGAATTAAGCTGCCGAATTTATAGTTCTTACCTCGGTGTTAAGTGGATTAACGATGAGCGTGTTCGCAAGGCACTGCATATCCGAGAGGGAACCATAGGGAAATGGGTACGTTGTTACAAGACTGATTTTGAGTATGAGATCTTTGATAGCTTTGAGTTTCATGCAAATCTAAGCAAAAAAGGATATCGCTCTTTGATATACAGTGGAGATCATGATGCAGTTGTTCCTTTCATGTCTACTCAAGCTTGGATAAGGGCTCTAAACTACTCCATTGTTGATGATTGGAGGCCTTGGTTTGTAAATGGCCAAGTGGGAGGATACACAAGGACTTACTCGAATCGAATGACATTTGCAACTGTGAAGGGTTCGGGACATATGGCTCCCGAGTACACTCCCGAGCAATGTTTTTCCATGTTGACTAAGTGGATATTGAATTTGCCTTTGTAA 1443 0.4061 MEHLKKSEEMKNMMVPPSHSSLYYCFQILLALVLLSLQLEASSSSSKVEVLPGFEGPLPFELETGYVGLGEPDDDDDMQVFYYFIKSENDPKKDPLMLWLTGGPGCSSFSGLVYQIGPVEFEIKEYNGSVPSLVLRPQSWTKLCSIIFVDLPLGTGFSYAKNLTAHRSDWKLVHHTHQFLRKWLIDHPEFLSNEFYFGADSYSGIPVPAIVQEISNGNEEGLQPSINLQGYLLGNPITTRREKNYQISYAHGMGLISDELYASLQKNCKGEYIDVDSRNELCLRDLQSFDENLSGINQFYILDSYCENDTPLWRRSLSHELKKSSSSHLTVPELSCRIYSSYLGVKWINDERVRKALHIREGTIGKWVRCYKTDFEYEIFDSFEFHANLSKKGYRSLIYSGDHDAVVPFMSTQAWIRALNYSIVDDWRPWFVNGQVGGYTRTYSNRMTFATVKGSGHMAPEYTPEQCFSMLTKWILNLPL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00617 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Trre7g00617 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 159 IPR001563 GO:0004185|GO:0006508
Trre7g00617 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 148 IPR001563 GO:0004185|GO:0006508
Trre7g00617 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Trre7g00617 480 SUPERFAMILY alpha/beta-Hydrolases 51 479 IPR029058 -
Trre7g00617 480 Pfam Serine carboxypeptidase 52 476 IPR001563 GO:0004185|GO:0006508
Trre7g00617 480 FunFam Carboxypeptidase 382 477 - -
Trre7g00617 480 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 46 464 IPR001563 GO:0004185|GO:0006508
Trre7g00617 480 Gene3D alpha/beta hydrolase 48 479 IPR029058 -
Trre7g00617 480 FunFam Serine carboxypeptidase-like 11 42 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00617 Trre-Chr7 3922720 3927630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00617 42 77 Calmodulin-binding Proteins AT2G22960 58.333 5.24e-07 48.1