Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00615 ATGATGGTTCTTCCTTCTCATAATTCATTTCACCATTGTTGTCAGATTCTACTTGCTCTTCTGCTTTTCAGTTTGCATATATTAACTCATCACATTGAAGCTTATGGCTCAAAGGTTGAAGTGCTTCCTGGTTTTCACGGGCCTCTTCCTTTTGAACTTGAAACAGGGTATGTGGGATTGGGGGAAACAGATGATGACATGCAAGTGTTCTATTATTTTATCAAATCAGAGAATGATCCTAAGAAAGACCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGTTGTTCTTCTTTTTCTGGCCTTGTCCATGAAATAGGTCCAATTGAATTTGAAACCAAGGAGTATGACGGGAGCGTGCCTAGTTTGGTCTCAAGGCCACAGTCATGGACAAAGCTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATCTCACTGCTCACCGAAGCGATTGGAAACTAGTTCACCATACTCATCAATTTCTTAGGAAGTGGCTGATTGATCACACTGAATTTCTTTCAAATGAATTCTACATTGGTGCTGATTCATACTCTGGCATTCCTGTTCCTGTTATTGTTCAAGAAATTTCAAATGCAAATGAAGAAGGTCTCCAACCATCGATAAATCTTCAGGGATATCTACTAGGGAACCCGATAACAACACGACGAGAAAAAAATTATCGAATCCCATATGCTAATGGAATGGGACTCATCTCCGATGAACTCTATGAGTCATTGCAGAAAAATTGTAAAGGAGAGTATATTGATGTAGATTCCAGTAATGAGTTGTGTTTAAGAGATCTCAAGTCTTATGATGAGAGCCTTTCAGGAATTAATGAAGCCAACATTTTGGATCGCTTTTGTGAAGATGATTCACGTCTATGGAGGAGATCATTGATTCAGGAGTTGAAGAAATCTTCTAGTTCTCATCTCACAGTGCCCAAAATAAGCTGCACAATTTATAGTTTTTACCTGAATACTAAATGGGCAAACGATGAACGTGTTCGCAAGGCACTGCATATTCGAGAGGGAACCATAGGGAAATGGGAACGTTGTTACAAGACTGATTTTGAGTATGAGATCTTTGATAGCTCCGAGTTTCATGCAAATCTAAGCAAAAAAGGATATCGCTCATTGATATACAGTGGAGATCAGGATAAAATAGTTCCTTTCATGTCTACTCAAGCTTGGATAAAGGCTCTAAACTACTCAATTGTGGATGATTGGAGGCCATGGTTTGTAAATGGCCAAGTGGGAGGATACACAAGGACTTACTCGAATCGAATGACATTTGCTACCGTGAAGGGTTCAGGGCATGTAGCTCCTATGTACACTCCCGAGCAATGTTTTGCCATGTTCACTAAATGGATATCTAATTTGCCTTTGTAA 1410 0.3943 MMVLPSHNSFHHCCQILLALLLFSLHILTHHIEAYGSKVEVLPGFHGPLPFELETGYVGLGETDDDMQVFYYFIKSENDPKKDPLMLWLTGGPGCSSFSGLVHEIGPIEFETKEYDGSVPSLVSRPQSWTKLCSIIFVDLPLGTGFSYAKNLTAHRSDWKLVHHTHQFLRKWLIDHTEFLSNEFYIGADSYSGIPVPVIVQEISNANEEGLQPSINLQGYLLGNPITTRREKNYRIPYANGMGLISDELYESLQKNCKGEYIDVDSSNELCLRDLKSYDESLSGINEANILDRFCEDDSRLWRRSLIQELKKSSSSHLTVPKISCTIYSFYLNTKWANDERVRKALHIREGTIGKWERCYKTDFEYEIFDSSEFHANLSKKGYRSLIYSGDQDKIVPFMSTQAWIKALNYSIVDDWRPWFVNGQVGGYTRTYSNRMTFATVKGSGHVAPMYTPEQCFAMFTKWISNLPL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00615 469 Gene3D - 325 468 - -
Trre7g00615 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Trre7g00615 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Trre7g00615 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Trre7g00615 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Trre7g00615 469 FunFam Carboxypeptidase 373 466 - -
Trre7g00615 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 453 IPR001563 GO:0004185|GO:0006508
Trre7g00615 469 SUPERFAMILY alpha/beta-Hydrolases 42 468 IPR029058 -
Trre7g00615 469 Gene3D alpha/beta hydrolase 33 306 IPR029058 -
Trre7g00615 469 Pfam Serine carboxypeptidase 43 466 IPR001563 GO:0004185|GO:0006508
Trre7g00615 469 FunFam Serine carboxypeptidase-like 11 33 469 - -
Trre7g00615 469 FunFam Carboxypeptidase 324 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00615 Trre-Chr7 3909104 3917457 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00615 30 62 Calmodulin-binding Proteins AT2G22960 66.667 1.74e-07 49.7