Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00613 ATGAAGAAGACGATGTTCTACTCTAGCTCAAAGGTTGAAGTGCTTCCTGGTTTTGAAGGGTCTCTTCCTTTTGAGCTTGAAACAGGGTATGTGGGATTGGGGGAAACAGATGATGACATGCAAGTGTTCTATTATTTTATCAAATCAGAGAATAATCCTAAGAAAGACCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGATGTTCTTCTTTTTCTGGCCTTGTCTATGAAATAGGCCCAATTGCATTTGAAATCAAGGAGTACGACGGGAGCGTGCCTAGTTTGGTCTCGAGGCCACAGTCCTGGACAAAGCTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCGTATGCGAAAAATCTCACTGCTCACCGAAGTGACTGGAAATTAGTTCACCATGCTCATCAATTTCTTAGGAAGTGGCTGATTGATCACACTGAATTTCTTTCAAATGAATTCTACATTGGAGGTGATTCATACTCTGGCATTCCTGTTCCTGCTATTGTTCAAGAAATTTCAAATGGAAATGAAGAAGGTCTTCAACCATCGATAAATCTTCAGGGATATCTGCTAGGGAACCCGATAACAACACGAAGAGAAAAAAATGATCGAATCCCATATGCTCATGGAATGGGACTCATCTCTGATGAACTCTATGCGTCACTGCAGAAAAATTGTAAAGGAGAGTATATTGATGTAGATTCCAGAAATGACTTGTGTTTAAGAGATCTCAAGTCTTATGATGAGGCAAAGGATTCACTTCAATGGAGGCGATCATTGACTCAGGAGTTGAAGAAATCTTCTAGTTCTCATCTCACAGTTCCTGAATTAAGCTGCCATTTTTATAATTCTTACCTCACCACTAAATGGGCTGACGATGAGCGTGGAACGATAGGGAAATGGGTACGTTGTTACAAGACTGATTATGAGTATGAGATCTTTGATAGCACCGAGTTTCATGCAAATCTAAGCAAAAAAGGATATCGGTCATTGATATACAGTGGAGATCATGACCTAGTCGTTCCTTTCATGTCTACTCAAGCTTGGATAAGGGCTCTAAACTACTCCATTGTTGATGATTGGAGGCCTTGGTTTGTAAATGGCCAAGTGGGAGGATACACAAGGACTTACTCGAATCGAATGACATTTGCCACTGTGAAGGGTGCAGGACATATGGCTCCTGATGACACTCCTGAGCAATGTTTTGACATATTCACTAAGTGGATATCTAATTTGTTTTTGTAA 1257 0.4057 MKKTMFYSSSKVEVLPGFEGSLPFELETGYVGLGETDDDMQVFYYFIKSENNPKKDPLMLWLTGGPGCSSFSGLVYEIGPIAFEIKEYDGSVPSLVSRPQSWTKLCSIIFVDLPLGTGFSYAKNLTAHRSDWKLVHHAHQFLRKWLIDHTEFLSNEFYIGGDSYSGIPVPAIVQEISNGNEEGLQPSINLQGYLLGNPITTRREKNDRIPYAHGMGLISDELYASLQKNCKGEYIDVDSRNDLCLRDLKSYDEAKDSLQWRRSLTQELKKSSSSHLTVPELSCHFYNSYLTTKWADDERGTIGKWVRCYKTDYEYEIFDSTEFHANLSKKGYRSLIYSGDHDLVVPFMSTQAWIRALNYSIVDDWRPWFVNGQVGGYTRTYSNRMTFATVKGAGHMAPDDTPEQCFDIFTKWISNLFL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00613 418 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 402 IPR001563 GO:0004185|GO:0006508
Trre7g00613 418 Gene3D alpha/beta hydrolase 6 417 IPR029058 -
Trre7g00613 418 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 121 IPR001563 GO:0004185|GO:0006508
Trre7g00613 418 PRINTS Carboxypeptidase C serine protease (S10) family signature 98 110 IPR001563 GO:0004185|GO:0006508
Trre7g00613 418 PRINTS Carboxypeptidase C serine protease (S10) family signature 385 398 IPR001563 GO:0004185|GO:0006508
Trre7g00613 418 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Trre7g00613 418 FunFam Serine carboxypeptidase-like 11 6 418 - -
Trre7g00613 418 FunFam Carboxypeptidase 321 415 - -
Trre7g00613 418 Pfam Serine carboxypeptidase 16 415 IPR001563 GO:0004185|GO:0006508
Trre7g00613 418 SUPERFAMILY alpha/beta-Hydrolases 15 416 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00613 Trre-Chr7 3902550 3907579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00613 294 414 Calmodulin-binding Proteins AT2G22960 54.198 2.50e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00613 K16296 - tpra:123922058 751.895