Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00590 ATGTTGCCATCAAATAACGTGATATCCCTAGTTCAAAGATCTGCCGACAAGTCATCTCTCGGTACTTTGAAGGACCTTCAAAATTTTCGAAGTCTTTGTGTGGAGTGTGGCTCATATCTACAACAAACTCAAGATGTATTAAAAGCAACAAATTGTCAGAAATTGGAAGCAAGTGCATCTGCATCACAGATCTCTAATATGTATGTGTCTCCTATAATTGATGATTGCCTCAGTCAAGTTTGCTCTTCAGGGTCAAAAAATTACTTAAAATCTCTATTAATTCAAATGGGATCAACACACCAATTCCTCAATATAGCCGAAGACAACATTTTACAGACTTCAGATGGAACTTGGGATTCGTTTTTGCACCCATGTGACAATAATTCAGAATGGTTGACCTTCAGTTGCAAAGGTTGTTCCCTAATATTCGATCTCCCAACAATGAAGGGGAATAGCCTGAAGAGTATGATGTTGTTTGTTGTCTATTATTCTTCCCCGGACAATGAAACATTAGAAGGTTTCCAAGGCATGGTAATCATAAATTACACAAAGACAACCGTTCAAGCTTATAAAAGAGATACACTAACCACCATTAAGGAAGAGGAGTGGCAGAGCATAATATCAAATCTTGAACCTGGCAACAAAGTGGGGGTTGTGTTTATTTTTGGAGAGGGTTTCATTGTTGAGAAGACTACAGTATCTCTCATATATAATGAACCACTCAACAAAAAAGTGGAACACGAGGAAGATTTTTCTGGTGGTGATAATATGAATGTGCCGGCGGATGACAAAGTTACCTATCCTGGTCAAGATGAAAATGTAAGTGAAGATAAGCACCAGCATGAAGTGAATGAGAAAGCTAGTGTATCCGGTGATGATGCTATCATGGAATCAAATAAGAATTATGTTGTTCCTAGTGGCAGTGATATGCCAACAGATAAGAAGGTTATCATTTCTAGTAAAGATGAAAATAGATTCTGTGGACTCTTTACCAAACTTCCTTCCCTTGTTCGTGCTGTTCTGATGTCGCGGCCTTGCTGGTCTGGTCTGGTTGTCATTCTGCTTTGGATCACTTGCCGCCATTTTAAGAAGAGGAGAAGTCCAAACCTTCTTACAAGGTATATACGAAGAGGTAAATGGCTAGTGGATTGGGCACAAAAGCTTATTACTTACAAGAAGGCGAATGAAGCCCACAGTCGCAGGCAGTTGCAGAGTTTTCATTCAAACTGGAGGCTTTTGGGGGTAAATGGATGGATAGGTTGTGGATATTATGCTGGCGGATTCAGTGATTACTCTGACCGATTATCATCAAATCCATCCATGTCTTCCTTCACTACTAATCCAAAGTCGGGGAGTTACGATGTGTACTTGAGTTTCTGCGATGAAGATGCCGGTTCTTTTGCTATGGGTATCTATACGTCTCTTAGTTCCGAAGATGGAATCGTTGTCTTCTGGGACGATGAGAGGTTTGGAAATGGAGATCGAGAAATACTAACCTCGTCTCTGAATGTAATTGGAGAGTGCAAAATTGCTATAATCATATTTTCAAGAAAATATGTTAATTCAACATACTGTCTTCAAGAATTGGAGAAAATAACCGAGTGTTGCCAAACCATAGCTGGTCTCATTGTTCTGCCTGTGCTCTATGACAGTCTCCATCCCTCATACGGAAGTATCTTTGGGGAAGCTTTTCATGATTTTCTGGATAGAATCTCGATCGAGGAAGCCTCTAAAGTGGAAGATAAGTTCATGACTTGGGTGGCAGTGATCAGTAATAAAGCTTTCCAATATTCAGGATCAAGTGATTCAGTAAACGGGTTTGAAAGTGAATACATTAAGAATGTAGTTGAACATGTTACTCGTGCGATAAACAAGAGAGACTTCTCCCGTGATTTCTATACAGCGAGTGTAAAATCTGCCGCGCAAGATGTGATTCAACAATTGAAACAATCAAAATCTCCTTTCCTACTAGGGATATGGGGGATGCCAGGGATTGGTAAATCAACGATTGCTCAAGCTATTTATGATCAAATTGGTCCCTATTTTGAGCACAAGTGCTTGCACAAAAACATGGAAGAAAATGATAAAGTTTCATTACAACAGAAACTTCTTTTTCATATCCACAAACTAACCGGAATAGAGATACCTACAATTGGATCAGTAAGTGAGATTTTAAAAGAAAAACTTCAACATAAAAGGCTACTTCTTGTACTCGACGATGTTGATAAGGAGCAGCTAAAGGCTTTGTGTGAAATTTGGGATTGGTTTGGTCCAGGTAGCAAAATAATCATTGCAACAACAGATAGGCATCTACTTAAGGAGTATGGAGTTGACCATATATATCCAGTGAATGAACTAGACGAAAGTGAATCACTTGAGCTTTTTAATTGGTGTGTATTCAGTGAAGCAACAACTCCTCCAGAAGATTTTGTTGAACTTTCTAGACAGATGGTTGCTTATTCTGCGGGATTGCCCCTTGCTCTTACAGCCCTTGGGAGGTTTTTGTGTCAAAAAGACGTACTTCAGTGGAAAGGCGTGTTAAGTAGTCTGAAAAGATTTTCCTTTCCAGTTCAAGAAGTACTAGAAGCTCTAAAAATGGGTTTTGATGCTTTGAGTGATGAAGAGAAACAAATCTTCCTAGATATTGCATGCTTCTTTAACGGGATGGACAAAAATAATGTACTCCATAGATTAAATAAGTCAACACAATCCACAGCTCTTCATATAAGTCTCCTTGAAGACAAGAGCCTCTTAACCATTGATGAGAATAACAAGCTTCAAGTGCATGTTCTGCTACAAGCCATGGCAAGATATATCATTAAGAGGGAATCAAGTAATTTCACTAATCAGCCGAAGATGTATGATGTGTTTTTGAGTTTCAGAGGAGAAGATACTCGTGCGAAGTTTGTATCACATCTCTATGCCTCTCTTAAAAATGCCGCGATTTATACTTTCAGAGACGATGACGAGATTCAACGAGGAGACCGGATCTCACTCTCACTGTTGCGAGCAATTGGAAAATCTAGAATTTTTATCGTTGTATTGTCTAAAAATTATGCTAATTCAAGATGGTGTATGCTAGAGTTGGAGAAGATCTTGGAAGTTGGCAGAACCAGGGGTCTGGTCGTAGTGCCCGTGTTTTATGAGATAGCTTCTTCAGAAGTACAATATCAGAAAGGTCAGTTTGGGAAAGCTTTTGAAGATCTTATATCAACAATCTCAGTGGATGAATCCACAAAAAGTAATTGGAGAAGAGATCTTCTTGATATTAGTGGCAAAGCAGGGTTTTCACTGAGACATTCCAGGAGTGAAGATGCTGATATCAAGAATATTGTTGAACATGTCACCCGTTTGCTAGATAGGACAGAGTTATTTGTTGCTGAACATCCAGTGGGTGTAGAATCTCGTGTGGAAGCTGTGACTAAGCTACTAAACATCCAACAATCAGAAGATGTTTTAATTCTAGGGATATGGGGAATGAGGGGTACAGGTAAAACAACCATCGCCAAAGCCGTTTATAATCAAATTGGGAGCAAATTTGAGGGAAGGAGCTTCCTTTTGAATATAAGGGAATTTTGGGAGACAGATACTCATCGTGTTTCCCTACAGCAAAAGGTACTTTCTGATATTTATAAAACAACAACATTCAAGATACCTGAAATTGAAACAGGAAAAAGTATGTTGAAGCAAAGGCTTGAACATAATAGGGTACTTTTAGTGCTTGATGATGTGAATGAATTGGACCAACTAAAGTCTTTGTGTGGAAACCGCAAATGGTTTGGTCCGGGGAGTAGAATAATCATCACATCAATAGACAGGGATCTTCTTAGACTGGGTGAAGTTGATGGTGTGTATCCAATAGAAACAATGGACAAATGTGAAGCTCTTGAGCTTTTTAGCTGGCATGCATTCAAGCAATCAAGTCCGACAGAAGATTTTTCTACACACTCAAACGATGTGATTGCTTATTCTGGGAGATTGCCACTAGCACTTGAAGTCCTTGGGTCCTATTTGTGTAACTGTGAAATAACAGAGTGGCAGAATGTTTTGGAGAAACTCAAATGTATTCCCCATGATCAAGTACAGAAGAAGCTAAGAGTAAGCTTTGATGGTTTAAAAGATGTTACAGAGCAACAAATATTTCTTGATATAGCTTGTTTCTTTATTGGGACAGACCGAAATGATACAATGAAAATTTTAAATGGGTGTGGATTTTTTGCTGATACTGGAATGAGAGTCCTGGAACAGCGAAGCCTTTTAACTGTTGACAATAGGAACAAGCTCAGAATGCATGATTTGTTGAGAGACATGGGAAGACAAATAGTTTATGAGGAGTCACCATTAGATCCCGAGAACCGCAGTAGGTTGTGGCGCCATGAGGAAGTGTTTGATATATTATCAAAGCATAAGGGAACAGAAGCTGTCAAGGGACTGTCTTTGGAATTTCCAAGAGAAAATACTGTTGGCTTGAATACCAAAGCATTTAAGAAAATGAAAAAACTCAGATTGCTTCAACTTTCTGGTGTGCAGCTTAATGGAGACTTTAATTATCTTTCAGCAGATCTTAAATGGCTGTACTGGCATGGATTTCCATTGACTTGCACTCCTGAAGAATTTCAGCAAGGAAGTCTAGTGGCTCTCAAATTAAAATACAGTAATCTCGAACAAATATGGACAAAGAGCGAGATGCTAAAGAATCTTAAAATTCTTAATCTTAGCCATTCTCCGGATTTGACTGAAACCCCAGATTTTAAATGCTTGCCTAATCTTGAAAAGCTAGTACTCAAAAACTGTACAAGTTTGTCCAAGATCTCCCATACCATTGGATCTCTGAGTAAACTTCTTCTGATAAATCTGACGGACTGCACAGGTCTTCGGAAACTTCCGAGAAGCATCTACAAATTAAAATCTCTAGAAACTTTGATTCTTTCAGGATGCTCCGAGATTGACAAATTGGAGGAGGACTTGGAGCAGATGAAATCCTTGATAACCTTGAATGCGGATCAGATTGATATAAGGAATGTGCCCTTTTCAATAGTCAAATTGAAAAACATTGGATATATATATTTTCATGGCTTAGAAGAATTTCCACGCGATGTATTCCCAACTCTCATTCGGTCTTGGATGTCACCATCCAGTAATGTGATATCGCTAGTTCAAAAATCTGCCCCCATGTCATCTCTTGTTACTTCGAAGGGCCTTCTAATGCTTCGAAGTCTTTGTGTGGAGTGTGGCTCACATCGACAACTAACTGAAGTTGTAGCAAGAATGTTGGTTGTGTTAAAAGATACAAACTGTCAGAACTTTGAAGCAAGTGCAAGTGCAAGTGCAACTACAACTACAACACAGATCTCTAATATGTATACTTCTCCTTTAATTGATGATTGCGTTGGTCAAGTTTGCACTTCAGGGTCAAGTAATTACTTGAAATCTCTCTTGATTCAAATGGGAATGAAATTCCAAGTCCCCAATATTGCCGAAGATAGCATTTTACAGACTGCAGATGGGTCTTGGGATTCGTTTTTGCACCCATATGACAATTATTCCGAATGGTCAACCTTCAGTTGCAAAGGTTGTTCCATAATATTTGATCTACCAACAATGAAGGGACATAGTCTGAAGAGTATGATGCTTTTCGTCGTCTATTATTCTTCCCCGGACAATAAGACATCAGAAGATTTACATGGTGTGTTAATCATAAATTACACAAAGACAACCATTCAGGTCTATAAAAGAGATACACTAACCTCCAATATGGATGAGGAGTGGCAGAGCATAATATCAAATCTAGAACCTGGCAACAAAATGGGGGTTGTGTTAATTTTTGGAGAGGGCTTCATTGTTGAGAAGACTACAGTATCTCTCTTATATAATGAAGCACTCGACAAAGAAATGGAATGCTGTCATGTAGTAGACGAGGAAGATATTTCTGGTGGTGATAATATGAATGTGCCGACAGATAAAAATGTTACCTTTTCTGGTCAAGATGAAAATGTAAGTGAGGATAAGCACCAGCATGAAGTGGATGAGAATGCTAGTGCTTCTGGTTATGATGCAATGGAATCAAATAAGAATTATGCTGTTTCTTGTGGCAGTGATATGCCAACAGATAAGAAGGTTATCATTTCTAGTGACGATGAAAATAGATTTAGTGGACTCTTCACCAAACTTCCTTCCCTTGTTCGTGCTGTTCTGATGTCGCGGCCTTTCTGGTCTGGTCTGGTTGTCATTTTGCTTTGGATCACTTGCCGCCATTTTAAGAAGAGAAGTCCAAACCTTCTTACAAGGTATATACGAAGAGGTAAATGGCTAGTGTATTGCGCACAAAAGCTTTTTAATTACAATAAGGCCAATGAAGCCCAAAGTCGCAGGCAGTTGCGAAGTTAA 6387 0.3892 MLPSNNVISLVQRSADKSSLGTLKDLQNFRSLCVECGSYLQQTQDVLKATNCQKLEASASASQISNMYVSPIIDDCLSQVCSSGSKNYLKSLLIQMGSTHQFLNIAEDNILQTSDGTWDSFLHPCDNNSEWLTFSCKGCSLIFDLPTMKGNSLKSMMLFVVYYSSPDNETLEGFQGMVIINYTKTTVQAYKRDTLTTIKEEEWQSIISNLEPGNKVGVVFIFGEGFIVEKTTVSLIYNEPLNKKVEHEEDFSGGDNMNVPADDKVTYPGQDENVSEDKHQHEVNEKASVSGDDAIMESNKNYVVPSGSDMPTDKKVIISSKDENRFCGLFTKLPSLVRAVLMSRPCWSGLVVILLWITCRHFKKRRSPNLLTRYIRRGKWLVDWAQKLITYKKANEAHSRRQLQSFHSNWRLLGVNGWIGCGYYAGGFSDYSDRLSSNPSMSSFTTNPKSGSYDVYLSFCDEDAGSFAMGIYTSLSSEDGIVVFWDDERFGNGDREILTSSLNVIGECKIAIIIFSRKYVNSTYCLQELEKITECCQTIAGLIVLPVLYDSLHPSYGSIFGEAFHDFLDRISIEEASKVEDKFMTWVAVISNKAFQYSGSSDSVNGFESEYIKNVVEHVTRAINKRDFSRDFYTASVKSAAQDVIQQLKQSKSPFLLGIWGMPGIGKSTIAQAIYDQIGPYFEHKCLHKNMEENDKVSLQQKLLFHIHKLTGIEIPTIGSVSEILKEKLQHKRLLLVLDDVDKEQLKALCEIWDWFGPGSKIIIATTDRHLLKEYGVDHIYPVNELDESESLELFNWCVFSEATTPPEDFVELSRQMVAYSAGLPLALTALGRFLCQKDVLQWKGVLSSLKRFSFPVQEVLEALKMGFDALSDEEKQIFLDIACFFNGMDKNNVLHRLNKSTQSTALHISLLEDKSLLTIDENNKLQVHVLLQAMARYIIKRESSNFTNQPKMYDVFLSFRGEDTRAKFVSHLYASLKNAAIYTFRDDDEIQRGDRISLSLLRAIGKSRIFIVVLSKNYANSRWCMLELEKILEVGRTRGLVVVPVFYEIASSEVQYQKGQFGKAFEDLISTISVDESTKSNWRRDLLDISGKAGFSLRHSRSEDADIKNIVEHVTRLLDRTELFVAEHPVGVESRVEAVTKLLNIQQSEDVLILGIWGMRGTGKTTIAKAVYNQIGSKFEGRSFLLNIREFWETDTHRVSLQQKVLSDIYKTTTFKIPEIETGKSMLKQRLEHNRVLLVLDDVNELDQLKSLCGNRKWFGPGSRIIITSIDRDLLRLGEVDGVYPIETMDKCEALELFSWHAFKQSSPTEDFSTHSNDVIAYSGRLPLALEVLGSYLCNCEITEWQNVLEKLKCIPHDQVQKKLRVSFDGLKDVTEQQIFLDIACFFIGTDRNDTMKILNGCGFFADTGMRVLEQRSLLTVDNRNKLRMHDLLRDMGRQIVYEESPLDPENRSRLWRHEEVFDILSKHKGTEAVKGLSLEFPRENTVGLNTKAFKKMKKLRLLQLSGVQLNGDFNYLSADLKWLYWHGFPLTCTPEEFQQGSLVALKLKYSNLEQIWTKSEMLKNLKILNLSHSPDLTETPDFKCLPNLEKLVLKNCTSLSKISHTIGSLSKLLLINLTDCTGLRKLPRSIYKLKSLETLILSGCSEIDKLEEDLEQMKSLITLNADQIDIRNVPFSIVKLKNIGYIYFHGLEEFPRDVFPTLIRSWMSPSSNVISLVQKSAPMSSLVTSKGLLMLRSLCVECGSHRQLTEVVARMLVVLKDTNCQNFEASASASATTTTTQISNMYTSPLIDDCVGQVCTSGSSNYLKSLLIQMGMKFQVPNIAEDSILQTADGSWDSFLHPYDNYSEWSTFSCKGCSIIFDLPTMKGHSLKSMMLFVVYYSSPDNKTSEDLHGVLIINYTKTTIQVYKRDTLTSNMDEEWQSIISNLEPGNKMGVVLIFGEGFIVEKTTVSLLYNEALDKEMECCHVVDEEDISGGDNMNVPTDKNVTFSGQDENVSEDKHQHEVDENASASGYDAMESNKNYAVSCGSDMPTDKKVIISSDDENRFSGLFTKLPSLVRAVLMSRPFWSGLVVILLWITCRHFKKRSPNLLTRYIRRGKWLVYCAQKLFNYNKANEAQSRRQLRS 2128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00590 2128 Gene3D - 631 780 IPR027417 -
Trre7g00590 2128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1117 1384 IPR027417 -
Trre7g00590 2128 SMART AAA_5 1151 1291 IPR003593 GO:0016887
Trre7g00590 2128 SMART AAA_5 653 786 IPR003593 GO:0016887
Trre7g00590 2128 ProSiteProfiles TIR domain profile. 451 591 IPR000157 GO:0007165
Trre7g00590 2128 Pfam NB-ARC domain 641 856 IPR002182 GO:0043531
Trre7g00590 2128 Pfam NB-ARC domain 1134 1359 IPR002182 GO:0043531
Trre7g00590 2128 SUPERFAMILY Toll/Interleukin receptor TIR domain 944 1086 IPR035897 -
Trre7g00590 2128 FunFam Disease resistance protein (TIR-NBS-LRR class) 950 1121 - -
Trre7g00590 2128 Gene3D Ribonuclease Inhibitor 1473 1754 IPR032675 -
Trre7g00590 2128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 642 882 IPR027417 -
Trre7g00590 2128 SUPERFAMILY Toll/Interleukin receptor TIR domain 450 557 IPR035897 -
Trre7g00590 2128 SUPERFAMILY L domain-like 1480 1762 - -
Trre7g00590 2128 Gene3D - 447 630 IPR035897 -
Trre7g00590 2128 SMART till_3 452 593 IPR000157 GO:0007165
Trre7g00590 2128 SMART till_3 953 1093 IPR000157 GO:0007165
Trre7g00590 2128 MobiDBLite consensus disorder prediction 1996 2015 - -
Trre7g00590 2128 Gene3D - 1289 1373 IPR042197 -
Trre7g00590 2128 Gene3D - 785 872 IPR042197 -
Trre7g00590 2128 Gene3D - 1118 1280 IPR027417 -
Trre7g00590 2128 Gene3D - 947 1117 IPR035897 -
Trre7g00590 2128 SUPERFAMILY "Winged helix" DNA-binding domain 1360 1466 IPR036390 -
Trre7g00590 2128 ProSiteProfiles TIR domain profile. 952 1119 IPR000157 GO:0007165
Trre7g00590 2128 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 954 1769 IPR044974 GO:0006952
Trre7g00590 2128 PRINTS Disease resistance protein signature 1231 1245 - -
Trre7g00590 2128 PRINTS Disease resistance protein signature 1633 1649 - -
Trre7g00590 2128 PRINTS Disease resistance protein signature 1324 1338 - -
Trre7g00590 2128 PRINTS Disease resistance protein signature 1154 1169 - -
Trre7g00590 2128 MobiDBLite consensus disorder prediction 1997 2011 - -
Trre7g00590 2128 Pfam TIR domain 954 1115 IPR000157 GO:0007165
Trre7g00590 2128 Pfam TIR domain 453 625 IPR000157 GO:0007165
Trre7g00590 2128 Coils Coil 1649 1669 - -
Trre7g00590 2128 SUPERFAMILY "Winged helix" DNA-binding domain 859 948 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00590 Trre-Chr7 3768197 3783071 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00590 450 946 WRKY Transcription Factor Family AT4G12020 28.627 4.59e-36 149