Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00586 ATGTCTTCTTCCCAAATCCATCCATGTCCTTTTGTTTCGCATCTATACAACTCTCTTAAATCAGAAGCTGGAGTTGCTGTTTTCTGGGACGACGAAAGAACAACATATGATCTTATTGTTGTTCCTTTGTTCTACGATGGTATCTACCCCTCCGACGGAACTTCTCATAGAAATTTGTATGCAGACAGTGATTTTGTGTATAGAATGTTGATCGGGGAAACCGAAGACAAGTTCATGATTTGGATGGCAGCCAATAGTCAAGCTACTACATATCCAGGATCAATTGACATCTTAAACAAATATGGGAATGAAAGTGAATATATTAAGAATGTAGTTGAACATGTTACTCGTGTGCTAAACAAGAGAGACTTGTTCAGTGGTTATACAGAGAGCACAGCTTCTCGTGCCGAAGATGTGATTCAATTGTTGAAACAATCAACAGGTCCTCTCGTAATAGGAATATGGGGGATGACAGGGATTGGCAAATCAACTATTGCCAAAGCCATTTATGAACAGATTGGTCCCTATTTTGAGGACAAGAGCATGTTCGAAAACATTCAGGGTGATTGGAAAAAAAATAATGCTGATCGACTTCATTTCACAGCGAATTTTTTTAATATCGGTGTATCAACTAAAATGAAGATACATACAATTGAATCAGGAAAGGTGGTTTTAAACGAAATAATTGTACAGAAAAGAGTACTTTTTATACTTGACAATGTTGATAAGTTGGAGCAGCTAGATTATGTGCGTCGTGAATTGTTCGGAAAAGGTAGCAAATTAATAATCACTACAAGAAATAGGCATCTACTTAAGACACCCAAAGTTGATTGTATATATAGAGTGAAAGAACTGGATGAAAGTGAATCGCTTAAGGTTTTTAATTTTGACGCATTCCGCCAAGCAACAAGTCCTGGAGAAGATTTTGGCGAACTTTCCAGACAGATAGTTGCTTATTCTAGGGGATTGCCTCTTGCTCTTGGAGAACTTGGGTGGTTTTTGCGTGGAAAGGAAATACTTGAGTGGAAAGGTACTTTGAGGAGCCTCGAAAGATTTTCCATTCCAGTTCCAGAACTACTAAAAGCTCTAGAAAAGATTTTTAGTGATTTGAGTAAACAAGAGGAACAATTATTCCTTGATATAGCATGTTTCTTTATCGGGATGAACCAAAATGATGTACTCCAAACATTAAATGATAGGTCAACACAATGCACAACTCTTCAAATAGGTCTCCTTGAAGACAAGAGCCTTCTAACCATTGATGAGAATAACAAGCTTCAAATGCATGTTCTGCTACAAGCCATGGTAAAAGATATCATTAAGAGGGAACCAAGTAATATGACTAATCAGCCAAAGATAACTAAGGGTCTGGTGGTTGTGCCAGTATTCTACGAGGTAGATCCCTCTGAAGTACGTCATCAGAAAGGTGAGTTTGGAGAAAAATTTGATGCTCTTTTATCAAAAATCTCAGTGGATGAATATACAAAGAGTAATTGGAGAAGAGACCTCATTGATATTGGTGGCATAGCAGGGTTTGTACTCATAGGTTCCAGGAATGAAAGTGCTGATATCAAGAATATTGTTGAACGTGTCATCCGTTTGCTAGATCGAACAGAATTATTTGTTGCTGAACATCCACGAAGCCTTTTAACTGTTGACAATAGGAACAAGCTTAGAATGCATGATTTGTTGAGAGACATGGGAAGACATATAATTTATGAGGAATCACCATTTGATCCCGAGAAGCGTAGTAGGTTGTGGCGGCGTGAGGAAGTGTTTGATATATTATCAAAGTATAAGGGAACAGAAGCTGTCAAGGGACTGACTTTGGAACTTCCAAGAAATAATACAGTTTGTCTGAATACCAAAGCATTTAAGAAGATGAATAAACTCAGATTGCTTCGACTTGCCGGAGTGCAGCTTAATGGAGATTTTAAATATCTTTCTGGAGAACTTAGGTGGTTAAACTGGCATGGATTTCCATCAACTTATGCACCTGCAGAATTTCAACAAGGAATTCTAGTTGCCATTACACTAAAATATAGTAATCTAAAACAGATATGGAAGAAGAGCCAGATGCTAGAGAATCTAAAAATTCTTAATCTTAGTCATTCTCGGAATTTGACTGAAACTCCAGATTTTTCAGACACGCCTAATCTTGAAAAGCTAATACTCAAAGACTGTCCCAGTTTGTCTGCGGTCTCCCATACTATTGGATCACTCGATAAACTTCTTCTTATCAATTTGACAGACTGCACAGGTCTTTTGAAACTTCCGAGAAGCATCTATAAATTAAAATCTCTGGAAACTTTGATCCTTTCAGGATGTTCCATGATTGACAAATTGGAGGAGGACTTAGAACAGATGAAATCTTTGACAACTTTGATTGCGGATAAGACTGCCATAACAAAAGTGCCCTTTTCAATAGTAAGGTCAAAAAGCATTGGGTATATTTCTTTGTGTGGCTTTAAAGGATTTTCGCGTGATGTATTTCCTTCTCTCATTCTGTCTTGGATGTCACCATCAAATAATGTGATATCCCAAGTTCAGACATCAATGTCCCTGTCATCTCTTGGTACTTTCAAGGACCTTCTAAAGCTTCGAAGTCTTTGTGTGGAGTGTGGCTCACAGCTACAACTAAATCAAGATGTAGCAAGAATTTTGGATATATTAAAAGCCACGAATAGTCATAATTTTGATGCAAGTACAAGTGCGACTACATCACAGATCTCTGATATGTATGCTTCTCCTTTAATTGATGATTGCCTTGGTTTAGTTCACATTTCAAGGTCAAAGAAATACTCGAAATCTCTCATAATTCAAATGGGAACGAAATGCCGAGTTTCAAATATTACCAGAGACAGTATTTTTCAGACTGCAGATGGGTCTTCGTGTTCGTTTATGCCACCCTCAATCAATAAATTTGATTGGTTTAACTTAAGTTGCAAAGGTTGTTCTGTAACATTTGATGTCCCAACAATGAAGGGGAATAACCTGAAGAGTATGATGTTGTTCGTCACCTATTACTCTTCCCCAGACAACATAACATCAGAATGTTGCCAAGGTGTGTTGATCATAAATTACACAAAGACAACCATTCACGCCTATAAAAGAGATACACTAACCTCTTTTAGCCATGAGGATTGGCAGACCATAACATCAAATCTAGAACCTGGTAACAAAGTAAAGGTTATGGTTGTTTTTGGGGAGGGATTCGTTGTTGAGAAGACAACACTATCTCTCTTATATGGTGAACCAGTCGACAAAGAAATGAAACACTGTAAGGCCGTACATGAGGAGGATGTTATTGTTTCCAGTGGCGGTAATATTGATATTCCAGCAGACAACAATGTTACTGGTCCACAGCAAGATGAAAATGAAAGTGAAGATGAGCACGGACATGCAATATGTAGAAAGAGGAAGAGATGA 3429 0.378 MSSSQIHPCPFVSHLYNSLKSEAGVAVFWDDERTTYDLIVVPLFYDGIYPSDGTSHRNLYADSDFVYRMLIGETEDKFMIWMAANSQATTYPGSIDILNKYGNESEYIKNVVEHVTRVLNKRDLFSGYTESTASRAEDVIQLLKQSTGPLVIGIWGMTGIGKSTIAKAIYEQIGPYFEDKSMFENIQGDWKKNNADRLHFTANFFNIGVSTKMKIHTIESGKVVLNEIIVQKRVLFILDNVDKLEQLDYVRRELFGKGSKLIITTRNRHLLKTPKVDCIYRVKELDESESLKVFNFDAFRQATSPGEDFGELSRQIVAYSRGLPLALGELGWFLRGKEILEWKGTLRSLERFSIPVPELLKALEKIFSDLSKQEEQLFLDIACFFIGMNQNDVLQTLNDRSTQCTTLQIGLLEDKSLLTIDENNKLQMHVLLQAMVKDIIKREPSNMTNQPKITKGLVVVPVFYEVDPSEVRHQKGEFGEKFDALLSKISVDEYTKSNWRRDLIDIGGIAGFVLIGSRNESADIKNIVERVIRLLDRTELFVAEHPRSLLTVDNRNKLRMHDLLRDMGRHIIYEESPFDPEKRSRLWRREEVFDILSKYKGTEAVKGLTLELPRNNTVCLNTKAFKKMNKLRLLRLAGVQLNGDFKYLSGELRWLNWHGFPSTYAPAEFQQGILVAITLKYSNLKQIWKKSQMLENLKILNLSHSRNLTETPDFSDTPNLEKLILKDCPSLSAVSHTIGSLDKLLLINLTDCTGLLKLPRSIYKLKSLETLILSGCSMIDKLEEDLEQMKSLTTLIADKTAITKVPFSIVRSKSIGYISLCGFKGFSRDVFPSLILSWMSPSNNVISQVQTSMSLSSLGTFKDLLKLRSLCVECGSQLQLNQDVARILDILKATNSHNFDASTSATTSQISDMYASPLIDDCLGLVHISRSKKYSKSLIIQMGTKCRVSNITRDSIFQTADGSSCSFMPPSINKFDWFNLSCKGCSVTFDVPTMKGNNLKSMMLFVTYYSSPDNITSECCQGVLIINYTKTTIHAYKRDTLTSFSHEDWQTITSNLEPGNKVKVMVVFGEGFVVEKTTLSLLYGEPVDKEMKHCKAVHEEDVIVSSGGNIDIPADNNVTGPQQDENESEDEHGHAICRKRKR 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00586 1142 PRINTS Disease resistance protein signature 151 166 - -
Trre7g00586 1142 PRINTS Disease resistance protein signature 228 242 - -
Trre7g00586 1142 PRINTS Disease resistance protein signature 320 334 - -
Trre7g00586 1142 PRINTS Disease resistance protein signature 692 708 - -
Trre7g00586 1142 Pfam TIR domain 447 531 IPR000157 GO:0007165
Trre7g00586 1142 Gene3D Ribonuclease Inhibitor 603 828 IPR032675 -
Trre7g00586 1142 Gene3D - 110 277 IPR027417 -
Trre7g00586 1142 MobiDBLite consensus disorder prediction 1107 1142 - -
Trre7g00586 1142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 381 IPR027417 -
Trre7g00586 1142 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 455 536 IPR044974 GO:0006952
Trre7g00586 1142 Pfam NB-ARC domain 137 355 IPR002182 GO:0043531
Trre7g00586 1142 Gene3D - 433 543 IPR035897 -
Trre7g00586 1142 Gene3D - 284 370 IPR042197 -
Trre7g00586 1142 SMART AAA_5 148 286 IPR003593 GO:0016887
Trre7g00586 1142 SUPERFAMILY "Winged helix" DNA-binding domain 362 443 IPR036390 -
Trre7g00586 1142 SUPERFAMILY Toll/Interleukin receptor TIR domain 453 511 IPR035897 -
Trre7g00586 1142 SUPERFAMILY L domain-like 559 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00586 Trre-Chr7 3738279 3745078 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00586 547 809 WRKY Transcription Factor Family AT4G12020 34.767 3.10e-30 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00586 - - mtr:11411578 857.825