Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00584 ATGTCTTCCTTCACTTTCTCCTCAAAAAGCCACTCTGATGAATTTGAGTCCACATCTACTTCTACTGATCCAAACAGGAAGAGGTATGATGTGTACCTAAGTTTCTGTGTGGAAGACTCACGTTCTTTTGTGTTGGGTATATATGGAACTCTTACTTCACAACATGGACTTGTTGTTTTCTTGGACAATCAAAGACATATCTTTGAAAGGGAATCAAATAATAAGACTAATCAGCCGAAGGAGTACGACGTGCTCTTGAGTTTCAGAGGGGAAGACAGTCGTGCAAAAACTAGGGGTCTTGTGGTTGTGCCAGTGTTCTACGAGGTAGATCCCTCTGAAGTACGTCATCAAAAAGGTCAATTTGGAGAAAATTTCGATGACCTTTTATCAAAAATCTCAGTGGATGAATCTACAAAGAGTAACTGGAGAAGAGACCTCATTGATATTGGTGGCATAGCAGGGTTTGTACTCGTAGATTCGAGGAATGAAAGTGCTGATATCAAGAATATTGTTGAACGTGTCACCCAGCGAAGCCTTGTAACTGTTGACAATAGGAACAAGCTTAGAATGCATCATTTGTTGAGAGACATGGGAAGACACATAATTTATGAGGAATCACCATTTGATCCCGAGAAGCGCAGTAGGCTGTGGCGGCGTGAGGAAGTGTTTGATATATTATCAAAGCATAAGGGAACAGAAGCTGTCAAGGGACTGACTTTGGAACTTCCAAGAAATAATACAGTTTGTCTGGATACCAAAGCATTTAAGAAGCTGAATAAACTCAGATTGCTTCGACTTGCCGGAGTGCAGCTTAATGGAGATTTTAAATATCTTTCTGGAGAACTTAGGTGGTTGCACTGGCATGGATTTCCATCAACTTATGCACCTGCAGAATTTCAACAAGGAATTCTAGTTGCCATTACACTAAAATATAGTAATCTAAAACAGATATGGAAGAAGAGCCAGATGCTAGAGAATCTAAAAATTCTTAATCTTAGTCATTCTCGGAATTTGACTGAAACTCCAGATTTTTCAGACACGCCTAATCTTGAAAAGCTAATACTCAAAGACTGTCCCAGTTTGTCTGCGGTCTCCCATACTATTGGATCACTCGATAAACTTCTTCTTATCAATTTGACAGACTGCACAGGTCTTTTGAAACTTCCGAGAAGCATCTATAAATTAAAATCTCTGGAAACTTTGATCCTTTCAGGATGTTCCATGATTGACAAATTGGAGGAGGACTTAGAACAGATGAAATCTTTGACAACTTTGATTGCGGATAAGACTGCCATAACAAAAGTGCCCTTTTCAATAGTAAGGTCAAAAAGCATTGGGTATATTTCTATGTGTGGCTTTAAAGGATTTTCGCGTGATGTATTTCCTTCTCTCATTCTGTCTTGGATGTCACCATCAAATAATGTGATATCCCAAGTTCAGACATCGATGTCCCTGTCATCTCTTGGTACTTTCAAGGACCTTCTAAAGCTTCGAAGTCTTTGTGTGGAGTGTGGCTCACAGCTACAACTAAATCAAGATGTAGCAAGAATTTTGGATATATTAAAAGCCACGAATAGTCATAATTTTGATGCAAGTACAAGTGCGACTACATCACAGATCTCTGATATGTATGCTTCTCCTTTAATTGATGATTGCCTTGGTTTAGTTCACATTTCAAGGTCAAAGAAATACTCGAAATCTCTCATAATTCAAATGGGAACGAAATGCCGAGTTTCAAATATTACCAGAGACAGTATTTTTCAGACTGCAGATGGGTCTTCGTGTTCGTTTATGCCACCCTCAAACAATAAATCTGACTGGTTTAACTTAAGTTGCAAAGGTTGTTCTGTAACATTTGATGTCCCAACAATGAAGGGGAATAACCTGAAGAGTATGATGTTGTTCGTCACCTATTACTCTTCCCCAGACAACATAACATCAGAATGTTGCCAAGGTGTGTTGATCATAAATTACACAAAGACAACCATTCACGCCTATAAAAGAGATACACTAACCTCTTTTGGCCATGAGGATTGGCAGACCATAATATCAAATCTAGAACCAGGTAACAAAGTAGAGGTTATGGTTGTTTTTGGGGAGGGATTCGTTGTTGAGAAGACAACACTATCTCTCTTATATGGTGAACCAATCGACAAAGAAATGAAACACTGTAAGGCAGTACATGAGGAGGATGTTATTGTTTCCAGTGGCGGTAATATTGATATTCCAGCAGACAACAATGTTACTGGTCCACAGCAAGATGAAAATGAAAGTGAAGATGAGCACGGACATGCAATATGTAGAAAAAGGAAGAGAGGAGACACTACAAGGTTAAGAGAGTAG 2343 0.3901 MSSFTFSSKSHSDEFESTSTSTDPNRKRYDVYLSFCVEDSRSFVLGIYGTLTSQHGLVVFLDNQRHIFERESNNKTNQPKEYDVLLSFRGEDSRAKTRGLVVVPVFYEVDPSEVRHQKGQFGENFDDLLSKISVDESTKSNWRRDLIDIGGIAGFVLVDSRNESADIKNIVERVTQRSLVTVDNRNKLRMHHLLRDMGRHIIYEESPFDPEKRSRLWRREEVFDILSKHKGTEAVKGLTLELPRNNTVCLDTKAFKKLNKLRLLRLAGVQLNGDFKYLSGELRWLHWHGFPSTYAPAEFQQGILVAITLKYSNLKQIWKKSQMLENLKILNLSHSRNLTETPDFSDTPNLEKLILKDCPSLSAVSHTIGSLDKLLLINLTDCTGLLKLPRSIYKLKSLETLILSGCSMIDKLEEDLEQMKSLTTLIADKTAITKVPFSIVRSKSIGYISMCGFKGFSRDVFPSLILSWMSPSNNVISQVQTSMSLSSLGTFKDLLKLRSLCVECGSQLQLNQDVARILDILKATNSHNFDASTSATTSQISDMYASPLIDDCLGLVHISRSKKYSKSLIIQMGTKCRVSNITRDSIFQTADGSSCSFMPPSNNKSDWFNLSCKGCSVTFDVPTMKGNNLKSMMLFVTYYSSPDNITSECCQGVLIINYTKTTIHAYKRDTLTSFGHEDWQTIISNLEPGNKVEVMVVFGEGFVVEKTTLSLLYGEPIDKEMKHCKAVHEEDVIVSSGGNIDIPADNNVTGPQQDENESEDEHGHAICRKRKRGDTTRLRE 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00584 780 Gene3D - 2 68 IPR035897 -
Trre7g00584 780 ProSiteProfiles TIR domain profile. 27 178 IPR000157 GO:0007165
Trre7g00584 780 MobiDBLite consensus disorder prediction 736 780 - -
Trre7g00584 780 SUPERFAMILY L domain-like 189 501 - -
Trre7g00584 780 Gene3D - 93 184 IPR035897 -
Trre7g00584 780 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 152 IPR035897 -
Trre7g00584 780 Pfam TIR domain 95 184 IPR000157 GO:0007165
Trre7g00584 780 Gene3D Ribonuclease Inhibitor 233 452 IPR032675 -
Trre7g00584 780 MobiDBLite consensus disorder prediction 1 23 - -
Trre7g00584 780 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 176 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00584 Trre-Chr7 3716143 3722907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00584 174 439 WRKY Transcription Factor Family AT4G12020 33.688 1.13e-30 128