Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00577 ATGTCTTCCTCCACTTCCTCCTCAAAAAGGCGCCGCAAACTTAAATCCACATCTACTACTACTAATCCAAAGAGAAAGAGGTACAATGTTTACTTGAGTTTCTGCAACGAAGATGCGACTTCTTTTGCTACGGGTATCTATACGGCTCTTAGTAGAAAAGCTCTATTCAATGTTTTCTGGGACGACGAGAAGCTTGAAAGTGGAGATCGAGAAATACCAACCTCAATGCTGAAAGTTATAGGAGATTGCAAAGTTGCTGTAATCGTGTTTTCAAGAAATTATGTTAATTCAAGATCGTGCATTCAAGAATTTGAGAAAATAACCGAGTGTTGTCTAACCACAGGTGGTCTTATTGTTCTGCCTGTGCTCTATGATGGTCTCAATCACTATTCCGCAATCGGAACAAGTGGAGAGGCTTTTCATGATTTTGTGGATAGAATCTGGATAAAGGAAAAGGAAACTTCCTCTGAAGAGGAAGATAAGTTCATGACTTGGGTGGCAGCAATCACTAAAGCTACCACATATTCAGGACTGATTGATTTTGCAGACAGTTATGGAAGGGAATATATTAAGGATGTAGTTGAGAGTGTTACTCGTGCGGTAAACAAGAAGAGAGACCTGTTGGGTGCTTTCTATACAGTGAGTGTAAAATCCAGTGTGCAAGATGTGATTCAATTATTGAAACAATCAAGATGTCCTCTCCTACTAGGGATATGGGGGATGGCAGGGATTGGGAAATCAACCATTGCCGAAGCCATTTATAATCAGATTGGTCCCTATTTTGAGCACAAGTACTTGCTCGATAATGTCAGGGAAGTTTGGAAAGGAGAAGATTGGCCTTCTGATGGTCCAGTTTCTTTACAAGAGAAACTTCTTTCTTCTACGGGCATACCAACTGAAATACAGATAGGTACAATTGAATCAGGAAAAGTTATTTTAAAAGAAAGACTTCAACATAAAAGAGTACTTCTTGTACTTGACAATGTTGATAAATTGGTGCAGCTAAAGTCTTTGTGCGGAAATCGGGATTGGTTTGGTCCAGGTAGCAAAATAATCATCACGACTAGAGATAGGCATCTACTCAAGGAGCATGGAGTTGACCATATATATAGAGTGAAAGAATTGGAAGAAAGTGAATCGATTGAGCTTTTTAATCAGTGTGCATTCAGTCAAGCAACAAATCCTCAAGAAGGTTTTGGCGAACTTTCTAGACAGTTAGTTACATATTCTAGAGGATTGCCTATTGCTCTTAAAGCCCTTGGGGGGTTTTTACATGGAAAGGAAGTACTTGAGTGGAAAAGTGTGTGTAGCAGTCTTGAAAGATTTTCCTTTCCAGATCAAGAAGTACTACAAGCTCTAGAAACGAGTTTTGATGATTTGAGTGATGAAGCGAAACAAATATTCCTTGATATAGCATGTTTCTTTAGCGGGATGGAAAAAAATGACGTACTCCATACATTAAAAAATACGTCAACACAATGCACAGATCTTCAGATAAGTCTTCTTGAAGACAAGAGCCTTTTAACCATTGATGAGAATAACAAGCTTGAAATGCATGTTCTACTACAAGCCATGGCAAAATATATCATTAAGATGGAATCAAGTAATAAGACTGATCAGCCAAAGATGTACGATGTGTTCTTGAGTTTTAGAGGGGAAGACAGCCGTGCAAAGTTCATGTCACATCTCTACTCCTCTCTTCAAAATGCAGGGATTCATGTTTTCAGAGACGATGATGGGATTCAACGAGGGGATCAGATATCGATCTCACTGTTGCGAGCAATTGGACAATCTAGAATTTCTATCATTATTTTGTCTTCAAATTATGCTAATTCCAGGTGGTGTATGCTAGAATTGGTGAAGATAATGGAAATTGGTAGAACCAGGGGTTTGGTGGTTATGCCCGTGTTCTATGATGTAAATCCCTCAGAAGTACGTCATCAGGATGGTCAGTTTGGAAAAGCTTTTAAAGATCTTATCTCAACAATCTCAGTCGATGAATCCACTAAGAGTCAGTGGAGAAGAGACCTTATTGATATTGGTGGCATAGCAGGGTTTGTACTCATAGATTCCAGGAATGAAAGTGCAGATATCAAGAATATTGTTGAACATGTCACCCGTTTGCTTGATAGGACAGAGTTATTTGTTGCTGAACATCCGGTGGGTGTAGAATCTCGTGTGGAAGCTGTGACTAGGCTACTAAACATCCAAAAATCAGATGTTTTACTTCTAGGGATATGGGGAATGGGCGGTGTGGGTAAAACAACCATTGCCAAATCCATTTATAATCAAATTGGGAGCAAATTTGAGGGAAGGAGCTTCATTCTGAATATAAGAGAATTTTGGGAGACAAATAATAATCTAGTTTCTCTACAGCAACAGGTACTTTGTGATGTTTACAGAACTACGGCATTCAAGATACGCGACATAGAATCAGGGAAAAATATATTCAAAGAAAGACTTGCCCAGAATAGGGTGCTTGTTGTGCTTGATGATGTGAATGAATTGGACCAAGTAAAGGCTTTGTGTGGAAGCCGTGAATGGTTTGGTCCGGGGAGTAGAATAATCATCACCACAAGAGATATGCATCTTCTTAGATCGTGTAGTGTTGATCAAGTGTATACAATAGAAGAAATGGGCAAAAGTGAATCTCTTGAGCTTTTCAGTTGGCATGCATTCAAGCAGCCAAGTCCGACAAAAGCTTTTGCTGCACATTCAGCAGATGTGATTGCTTATTCTGGGAGATTGCCACTAGCACTTCAAGTCCTTGGGTCCTATTTGTCGGACTGTGAAATAACAGAGTGGCATAAAGTTTTGGACAAACTCAAATGCATTCCCCATGATGAAGTACATAAGAAGCTAAAAGTAAGCTTTGATGGTTTAAAAGATGTTACAGAGAAACAAATATTCCTTGATATAGCTTGTTTCTTTATTGGGATGGACAAAAATGATGTAATACAAATATTAAATGGGTGTGGGTTTTTTCCCGATATTGGAATTAAAGTCCTTATAGAGCGGACCCTTGTAACTGTTGACCATAGGAACAAGCTTAGAATGCATGAATTGTTGAGAGACATGGGAAGACAAATAGTTTATGAGGAATCACCGTTTGATCCTGAGAAGCGCAGTAGGTTGTGGCGGCGTGAGGAAGTGTTTGATATATTATCAAAGCATAAGGGAACAGAAGCTGTCAAGGGACTGGCTTTGGAGTTTCCAAGAGAAAATAATGTTTGTCTGAATACCAAAGCGTTTAAGAAGATGAATAAACTTAGATTGCTTCAACTTTCCGGGGTGCAGCTTCATGGAGATTTTAAATATCTCTCCGAGGATCTTAGATGGCTGTACTGGCATGGGTTTCCATCAACTTACACTCCTACAGAATTTCAGCAAGGAAGTTTAGTTTCCATCGAATTAAAATATAGTAATCTCAAACAATTATGGAAGAAGAGTCAGATACTAGAAAATCTAAAAATTCTTAATCTTAGTCATTCTCGGGATTTGTCTGAAACCCCTGACTTTTCATTCTTGCCTAATCTTGAAAAGCTAGTACTTAAAGACTGTCCAAGTTTGTCTGCAGTCTCCCATAGCATTGGATCTCTCCATAAACTTCTTCTAATAAATTTAACAGGCTGCACAGGGATTAAAAAACTTCCGAGAAGCATCTATAAATTGAAATCTCTAGAATCTTTGATTCTTTCAGGATGTTCCATGATTGACAAATTGGAGGAGGACTTGGAACAGATGGAATCGTTGAAAACCTTGATTGCGGATAAGACTGCTATAACAAAAGTGCCATTTTCAATAGTAAGGTTAAAAAACATTGGATATATTTCTATATGTGGCTTTGAAGGATTTTCACGTGATGTATTTCCTTCTCTCATTCGCTCTTGGTTGTCCCCATCAAGTAATGTGATATCCCTTGTTCAAACATCTACGTCTATGTCATCTCTTGGTACTCTCAAGGACCTTCTTAAGCTTCGAAGTTTTTGTGTGGAGTGTGGCTCAAAATTACAACTAACTCAAGATGTAGCAATAATTTTGGATGCATTAAAAGCCACAACTTTTCATAAACATGAAACAAATCCATGTGCAAGTACTTCAGGGTCAAATAATTACTTGAAATCTCTCTTAATTCAAATGGGAACGAAATGCCATGTCTCTAATATTACTGAAGACAGATATTTTCAGACTGCAGATGCATCTTGGGATTCATTTGTGCTCCCCTGCAACAATAATTCTGATTGGTTAACCTTTCGTTGCAAAGGTTGTTGCATAATGTTTGACCTCCCAACAATGAAGAGGCGTAACCTGAAGAGTATGCTGTTTTTTGTCACCTATTACTCTTCCCCGGACAACATAACATTAGAAGGTTGCCAAGGTGTGTTGATCATAAATTACACAAAGACAACTGTTCAGGTCTATAACAGAGATACACTAACCTCCTTTGAAGATGAGGATTGGCAGAGCACAACATCAAATCTAGAACCCAGTAACAAAGTGGTGGTTATGATTGTATTTGGGGAAGAATTCACTGTAGAGAAGACAACAGTATCTCTCTTATATGATGTACCGATCAACAAAGAAATGGAACATTGTGATGCAGTATCCAGGGACGATGTTACTGTTTCTAGTGATGACGACAACAATGTTAGTGATTACATTAATGCGCCGGTGGATAACAATGTTATTAGACATGGTGAAGATGAAAATATAGGTGAAGATAAACACTTGCATGCAGTGGATACGAATTCTATTGTTTCTCGTGATGATGCCACGGAAGCAAATCTGGATTATGCTGTCTCTGTTGCCGGTGATATGCCAGCAGATAAAATTGTTTCCATTTCTAGTGAAAATACGAGTGATAGTAAGAACGAGGATGTGGTGGATAAGGATGCTAATGCTTCTGGTAAAGCATATAAGAATGTTGTTGTTTCTACTGGAGATAAAAATAGAATTTGTAGACTCTTCATCAAGCTTCCTTCCCTTGTTCGTGCTGCTTTGATCTCACGCCCTTTCTGGTTCGGTCTGGTTTCCATTCTGGTTTGGATCACTTGCCGTGACTCTAAGAAGCGAAGTAGTTGGAACCTCCATACAAGATATACACAAAAGCGTAAATGGCTAGTGGATTGCGCACAAAAGTTTATTACATACAAAAAGGCCAACAGAGGCCACATTCTCAGCCATTTGCAGAGTTAA 5196 0.3874 MSSSTSSSKRRRKLKSTSTTTNPKRKRYNVYLSFCNEDATSFATGIYTALSRKALFNVFWDDEKLESGDREIPTSMLKVIGDCKVAVIVFSRNYVNSRSCIQEFEKITECCLTTGGLIVLPVLYDGLNHYSAIGTSGEAFHDFVDRIWIKEKETSSEEEDKFMTWVAAITKATTYSGLIDFADSYGREYIKDVVESVTRAVNKKRDLLGAFYTVSVKSSVQDVIQLLKQSRCPLLLGIWGMAGIGKSTIAEAIYNQIGPYFEHKYLLDNVREVWKGEDWPSDGPVSLQEKLLSSTGIPTEIQIGTIESGKVILKERLQHKRVLLVLDNVDKLVQLKSLCGNRDWFGPGSKIIITTRDRHLLKEHGVDHIYRVKELEESESIELFNQCAFSQATNPQEGFGELSRQLVTYSRGLPIALKALGGFLHGKEVLEWKSVCSSLERFSFPDQEVLQALETSFDDLSDEAKQIFLDIACFFSGMEKNDVLHTLKNTSTQCTDLQISLLEDKSLLTIDENNKLEMHVLLQAMAKYIIKMESSNKTDQPKMYDVFLSFRGEDSRAKFMSHLYSSLQNAGIHVFRDDDGIQRGDQISISLLRAIGQSRISIIILSSNYANSRWCMLELVKIMEIGRTRGLVVMPVFYDVNPSEVRHQDGQFGKAFKDLISTISVDESTKSQWRRDLIDIGGIAGFVLIDSRNESADIKNIVEHVTRLLDRTELFVAEHPVGVESRVEAVTRLLNIQKSDVLLLGIWGMGGVGKTTIAKSIYNQIGSKFEGRSFILNIREFWETNNNLVSLQQQVLCDVYRTTAFKIRDIESGKNIFKERLAQNRVLVVLDDVNELDQVKALCGSREWFGPGSRIIITTRDMHLLRSCSVDQVYTIEEMGKSESLELFSWHAFKQPSPTKAFAAHSADVIAYSGRLPLALQVLGSYLSDCEITEWHKVLDKLKCIPHDEVHKKLKVSFDGLKDVTEKQIFLDIACFFIGMDKNDVIQILNGCGFFPDIGIKVLIERTLVTVDHRNKLRMHELLRDMGRQIVYEESPFDPEKRSRLWRREEVFDILSKHKGTEAVKGLALEFPRENNVCLNTKAFKKMNKLRLLQLSGVQLHGDFKYLSEDLRWLYWHGFPSTYTPTEFQQGSLVSIELKYSNLKQLWKKSQILENLKILNLSHSRDLSETPDFSFLPNLEKLVLKDCPSLSAVSHSIGSLHKLLLINLTGCTGIKKLPRSIYKLKSLESLILSGCSMIDKLEEDLEQMESLKTLIADKTAITKVPFSIVRLKNIGYISICGFEGFSRDVFPSLIRSWLSPSSNVISLVQTSTSMSSLGTLKDLLKLRSFCVECGSKLQLTQDVAIILDALKATTFHKHETNPCASTSGSNNYLKSLLIQMGTKCHVSNITEDRYFQTADASWDSFVLPCNNNSDWLTFRCKGCCIMFDLPTMKRRNLKSMLFFVTYYSSPDNITLEGCQGVLIINYTKTTVQVYNRDTLTSFEDEDWQSTTSNLEPSNKVVVMIVFGEEFTVEKTTVSLLYDVPINKEMEHCDAVSRDDVTVSSDDDNNVSDYINAPVDNNVIRHGEDENIGEDKHLHAVDTNSIVSRDDATEANLDYAVSVAGDMPADKIVSISSENTSDSKNEDVVDKDANASGKAYKNVVVSTGDKNRICRLFIKLPSLVRAALISRPFWFGLVSILVWITCRDSKKRSSWNLHTRYTQKRKWLVDCAQKFITYKKANRGHILSHLQS 1731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00577 1731 SMART AAA_5 740 868 IPR003593 GO:0016887
Trre7g00577 1731 SMART AAA_5 232 375 IPR003593 GO:0016887
Trre7g00577 1731 Gene3D - 374 461 IPR042197 -
Trre7g00577 1731 Gene3D - 879 962 IPR042197 -
Trre7g00577 1731 Gene3D Ribonuclease Inhibitor 1056 1345 IPR032675 -
Trre7g00577 1731 Gene3D - 22 207 IPR035897 -
Trre7g00577 1731 Gene3D - 538 716 IPR035897 -
Trre7g00577 1731 MobiDBLite consensus disorder prediction 1 22 - -
Trre7g00577 1731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 471 IPR027417 -
Trre7g00577 1731 Coils Coil 1238 1258 - -
Trre7g00577 1731 ProSiteProfiles TIR domain profile. 542 709 IPR000157 GO:0007165
Trre7g00577 1731 SUPERFAMILY L domain-like 1018 1332 - -
Trre7g00577 1731 Gene3D - 210 369 IPR027417 -
Trre7g00577 1731 Gene3D - 717 876 IPR027417 -
Trre7g00577 1731 SUPERFAMILY Toll/Interleukin receptor TIR domain 534 681 IPR035897 -
Trre7g00577 1731 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 544 1339 IPR044974 GO:0006952
Trre7g00577 1731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 707 973 IPR027417 -
Trre7g00577 1731 Pfam NB-ARC domain 218 445 IPR002182 GO:0043531
Trre7g00577 1731 Pfam NB-ARC domain 724 948 IPR002182 GO:0043531
Trre7g00577 1731 SMART till_3 27 175 IPR000157 GO:0007165
Trre7g00577 1731 SMART till_3 543 683 IPR000157 GO:0007165
Trre7g00577 1731 FunFam Disease resistance protein (TIR-NBS-LRR class) 540 711 - -
Trre7g00577 1731 PRINTS Disease resistance protein signature 820 834 - -
Trre7g00577 1731 PRINTS Disease resistance protein signature 743 758 - -
Trre7g00577 1731 PRINTS Disease resistance protein signature 913 927 - -
Trre7g00577 1731 PRINTS Disease resistance protein signature 1151 1167 - -
Trre7g00577 1731 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 177 IPR035897 -
Trre7g00577 1731 ProSiteProfiles TIR domain profile. 26 155 IPR000157 GO:0007165
Trre7g00577 1731 Pfam TIR domain 28 149 IPR000157 GO:0007165
Trre7g00577 1731 Pfam TIR domain 544 706 IPR000157 GO:0007165
Trre7g00577 1731 SUPERFAMILY "Winged helix" DNA-binding domain 448 534 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00577 Trre-Chr7 3668633 3677154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00577 10 546 WRKY Transcription Factor Family AT4G12020 27.486 1.69e-35 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00577 - - mtr:11411578 2341.61